Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- golgi 3
- plasma membrane 3
- endoplasmic reticulum 3
- vacuole 3
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH67292 | Soybean | cytosol | 63.79 | 6.94 |
| KRG95622 | Soybean | nucleus, plastid | 68.97 | 6.67 |
| CDY55831 | Canola | mitochondrion | 53.45 | 6.25 |
| Solyc09g065880.2.1 | Tomato | nucleus | 55.17 | 5.41 |
| CDX73462 | Canola | plastid | 51.72 | 5.36 |
| CDX78253 | Canola | plastid | 51.72 | 5.35 |
| CDY64339 | Canola | plastid | 51.72 | 5.3 |
| AT3G54650.1 | Thale cress | plastid | 53.45 | 5.23 |
| PGSC0003DMT400049672 | Potato | nucleus | 53.45 | 5.21 |
| Bra007086.1-P | Field mustard | plastid | 51.72 | 5.17 |
| GSMUA_Achr4P21010_001 | Banana | mitochondrion | 43.1 | 5.11 |
| Zm00001d030990_P001 | Maize | cytosol | 51.72 | 5.05 |
| Zm00001d041414_P002 | Maize | cytosol | 51.72 | 5.0 |
| GSMUA_Achr4P28520_001 | Banana | cytosol, mitochondrion | 39.66 | 4.9 |
| TraesCS5D01G069500.1 | Wheat | plastid | 50.0 | 4.87 |
| TraesCS5B01G058300.1 | Wheat | plastid | 50.0 | 4.86 |
| Zm00001d033321_P001 | Maize | plastid | 48.28 | 4.85 |
| TraesCS5A01G058400.2 | Wheat | plastid | 50.0 | 4.85 |
| Os12t0601000-00 | Rice | plastid | 46.55 | 4.82 |
| KRH71335 | Soybean | nucleus | 48.28 | 4.75 |
| EER93780 | Sorghum | plastid | 48.28 | 4.71 |
| VIT_07s0141g00330.t01 | Wine grape | plastid | 46.55 | 4.7 |
| TraesCS5D01G388400.1 | Wheat | plastid | 44.83 | 4.63 |
| GSMUA_Achr2P12640_001 | Banana | plastid | 44.83 | 4.63 |
| PGSC0003DMT400051898 | Potato | cytosol | 46.55 | 4.58 |
| TraesCS5B01G382000.4 | Wheat | plastid | 41.38 | 4.57 |
| Solyc06g084060.2.1 | Tomato | cytosol, nucleus, plastid | 46.55 | 4.57 |
| KRH32101 | Soybean | nucleus | 46.55 | 4.56 |
| OQU79521 | Sorghum | plastid | 48.28 | 4.53 |
| HORVU5Hr1G093590.1 | Barley | extracellular | 44.83 | 4.44 |
| HORVU5Hr1G014320.7 | Barley | plastid | 51.72 | 4.39 |
| TraesCS5A01G378400.1 | Wheat | plastid | 41.38 | 4.24 |
| Bra014802.1-P | Field mustard | plastid | 50.0 | 3.7 |
| Os03t0633400-01 | Rice | extracellular, vacuole | 8.62 | 1.49 |
| HORVU5Hr1G093570.1 | Barley | plastid | 3.45 | 1.2 |
| Os03t0633100-00 | Rice | plastid | 3.45 | 0.97 |
Protein Annotations
| EMBL:ACUP02012536 | EnsemblPlants:KRG90050 | EnsemblPlantsGene:GLYMA_20G064300 | PANTHER:PTHR44840 | ProteinID:KRG90050 | ProteinID:KRG90050.1 |
| UniParc:UPI0006EE04F2 | UniProt:A0A0R0EGB7 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr20:+:21769113..21777328
Molecular Weight (calculated)
6447.6 Da
IEP (calculated)
6.496
GRAVY (calculated)
0.053
Length
58 amino acids
Sequence
(BLAST)
(BLAST)
1: MVWPSTTPDD VDSTILACIA FSCPNLAFLE ISVSDPAVNR ISRVLGRSHE HFTKHQVH
001: MQPQPHISPN TATAAISAAL ESQRSRKNRG SYNCGRCGQP KKGHVCLLTA PPDIPTTPIA SEPVSCISAA ASSSRSTVLS LTAAPSSRQT FTHLRRALSF
101: DDVDARNSLD ESDLDAASMD LDLQLDTDIV QPGRFHAVGL WEVLKRLPPS SLLMAARVCK GWRETSRKMW KAAEELRIRV PERAQIGYIG SLLQKCPRLI
201: RLSLKIESDF DATTLACIAF SCPNLEVLEI TTSGAAVNRI SGDELSRFVA NKRGLTSLKM EGCSNLGGFS LSSSSLSTLW LSDLHSLSKM IFNCPNLTEI
301: SLEFSRQEDD STDLVTMVDG LGRTCTRLQN IHIASLKLSH TVVLSLTAVN FRYLRMLSLV LGINITDASV AAISSGYKNL ELLDLSGSSI TDTGLGMICD
401: VLPDTLSKLL VALCPNITSS GIQFATAQLP LLELMDCGMT VSDPNSDNPT FVENPSPHKT PGYNQKMFIK HKRLKKLSLW GCSSLDALFL NCPELMDLNL
501: NLCSNLHPES LVLQCPKLQL VYASGCQGLL TGAIRKQVSE NFSAGENHMP RKRLADASKR IQALPSLYQE TREDGIYAGK RRKLEKEMCT IIH
101: DDVDARNSLD ESDLDAASMD LDLQLDTDIV QPGRFHAVGL WEVLKRLPPS SLLMAARVCK GWRETSRKMW KAAEELRIRV PERAQIGYIG SLLQKCPRLI
201: RLSLKIESDF DATTLACIAF SCPNLEVLEI TTSGAAVNRI SGDELSRFVA NKRGLTSLKM EGCSNLGGFS LSSSSLSTLW LSDLHSLSKM IFNCPNLTEI
301: SLEFSRQEDD STDLVTMVDG LGRTCTRLQN IHIASLKLSH TVVLSLTAVN FRYLRMLSLV LGINITDASV AAISSGYKNL ELLDLSGSSI TDTGLGMICD
401: VLPDTLSKLL VALCPNITSS GIQFATAQLP LLELMDCGMT VSDPNSDNPT FVENPSPHKT PGYNQKMFIK HKRLKKLSLW GCSSLDALFL NCPELMDLNL
501: NLCSNLHPES LVLQCPKLQL VYASGCQGLL TGAIRKQVSE NFSAGENHMP RKRLADASKR IQALPSLYQE TREDGIYAGK RRKLEKEMCT IIH
Arabidopsis Description
FBL17F-box/LRR-repeat protein 17 [Source:UniProtKB/Swiss-Prot;Acc:Q8W104]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.