Factsheet for HORVU5Hr1G014320.7

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G040110.3
HORVU3Hr1G064490.1
HORVU3Hr1G064580.1
HORVU4Hr1G080410.1
HORVU5Hr1G031690.1
HORVU5Hr1G068770.6

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G54650.1	HORVU1Hr1G040110.3	AT2G32710.1	18948957
AT3G54650.1	HORVU3Hr1G064490.1	AT2G32710.1	18948957
AT3G54650.1	HORVU3Hr1G064580.1	AT2G32710.1	18948957
AT3G54650.1	HORVU4Hr1G080410.1	AT2G32710.1	18948957
AT3G54650.1	HORVU5Hr1G031690.1	AT2G32710.1	18948957
AT3G54650.1	HORVU5Hr1G068770.6	AT3G19150.1	18948957

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G058300.1	Wheat	plastid	80.53	92.13
TraesCS5A01G058400.2	Wheat	plastid	79.8	91.14
TraesCS5D01G069500.1	Wheat	plastid	79.5	91.11
Os12t0601000-00	Rice	plastid	63.25	77.14
Zm00001d030990_P001	Maize	cytosol	60.91	70.03
Zm00001d041414_P002	Maize	cytosol	59.3	67.5
OQU79521	Sorghum	plastid	59.15	65.37
GSMUA_Achr4P21010_001	Banana	mitochondrion	41.73	58.28
GSMUA_Achr4P28520_001	Banana	cytosol, mitochondrion	39.82	58.0
GSMUA_Achr2P12640_001	Banana	plastid	46.56	56.58
HORVU5Hr1G093590.1	Barley	extracellular	46.12	53.75
KRG90050	Soybean	cytosol	4.39	51.72
VIT_07s0141g00330.t01	Wine grape	plastid	43.19	51.39
HORVU5Hr1G093570.1	Barley	plastid	12.15	50.0
KRH67292	Soybean	cytosol	38.8	49.72
CDY64339	Canola	plastid	41.14	49.65
PGSC0003DMT400051898	Potato	cytosol	41.73	48.31
KRH71335	Soybean	nucleus	41.58	48.14
CDX73462	Canola	plastid	39.39	48.04
KRG95622	Soybean	nucleus, plastid	42.17	48.0
CDX78253	Canola	plastid	39.39	47.95
Solyc09g065880.2.1	Tomato	nucleus	41.43	47.8
PGSC0003DMT400049672	Potato	nucleus	41.43	47.56
Solyc06g084060.2.1	Tomato	cytosol, nucleus, plastid	41.14	47.55
CDY55831	Canola	mitochondrion	33.97	46.77
Bra007086.1-P	Field mustard	plastid	39.53	46.55
KRH32101	Soybean	nucleus	40.12	46.28
AT3G54650.1	Thale cress	plastid	39.68	45.7
Bra014802.1-P	Field mustard	plastid	40.41	35.25

Protein Annotations

MapMan:19.2.2.8.1.4.6	Gene3D:3.80.10.10	UniProt:A0A287QEZ5	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:HORVU5Hr1G014320	EnsemblPlants:HORVU5Hr1G014320.7	InterPro:IPR001810	InterPro:IPR032675
InterPro:LRR_dom_sf	PFAM:PF00646	PANTHER:PTHR44840	PANTHER:PTHR44840:SF2	SUPFAM:SSF52047	SUPFAM:SSF81383
UniParc:UPI000B4646BF	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:50392198..50396978

Molecular Weight (calculated)

73094.7 Da

IEP (calculated)

9.050

GRAVY (calculated)

-0.111

Length

683 amino acids

Sequence
(BLAST)

001: TPASASARGA NPKNRTKNGK KGGQGRKSSR AREMAPTPRP SPALPVAPRP TLYFLASSTL PPIKPYPGYP TPTNPSHPSR PVPSQPRPQI PAPMASSDAL
101: SVVPAPDAAA AQPAAAAKKR GSYNCGRCGL PKKGHVCSIP GPPAAAAEHK PRRALHFDEA AALAGATDAT PVAVAYPAPH RPPEKKARVD VVDVDDSEPE
201: SGAAGMPGLV AVGSGVRVPG EVLIEVLRRL PPRAVAASAA VSRGWRDCAR RVWRGAEELR LRASGVSTIG TLLPRCPALS RLVLRMESDV DATMLACLAF
301: SCPNMQSLEI SMADSAVNRM TGDELTRFIS EKKCLAVLKV DRCSGLGFLN INSTSLSTLW LSDLSPLTKS VINCPNLSEL SLIFSQQDND STDLISMMDS
401: LGRSCSNLRK LHISSIHLCN EAVFALGSAN LRGLCMLSLL LGKKITDAAV ASIVRSFASL ELLDLSGSCI TDNGLGMISK AFPDTLTRLL LAMCPNITSC
501: GVQVAAAQLP LLQLMDCGKS LCANVQPEAP RSYFGDLNGG IRFCSKLQIT RKQQPTYQKL IIKHANLKKL SLWGCSAIDA LYVNCPELND LNLNSCTNLN
601: PERLLLQCPS LKDVHVTGCR DMLIGAIRNQ VLNEFAAAEP RMPCKRLADG SKRVQVPQFM LEQQFEDEKW CGESRRSQCA VHI

Best Arabidopsis Sequence Match ( AT3G54650.1 )
(BLAST)

001: MQPQPHISPN TATAAISAAL ESQRSRKNRG SYNCGRCGQP KKGHVCLLTA PPDIPTTPIA SEPVSCISAA ASSSRSTVLS LTAAPSSRQT FTHLRRALSF
101: DDVDARNSLD ESDLDAASMD LDLQLDTDIV QPGRFHAVGL WEVLKRLPPS SLLMAARVCK GWRETSRKMW KAAEELRIRV PERAQIGYIG SLLQKCPRLI
201: RLSLKIESDF DATTLACIAF SCPNLEVLEI TTSGAAVNRI SGDELSRFVA NKRGLTSLKM EGCSNLGGFS LSSSSLSTLW LSDLHSLSKM IFNCPNLTEI
301: SLEFSRQEDD STDLVTMVDG LGRTCTRLQN IHIASLKLSH TVVLSLTAVN FRYLRMLSLV LGINITDASV AAISSGYKNL ELLDLSGSSI TDTGLGMICD
401: VLPDTLSKLL VALCPNITSS GIQFATAQLP LLELMDCGMT VSDPNSDNPT FVENPSPHKT PGYNQKMFIK HKRLKKLSLW GCSSLDALFL NCPELMDLNL
501: NLCSNLHPES LVLQCPKLQL VYASGCQGLL TGAIRKQVSE NFSAGENHMP RKRLADASKR IQALPSLYQE TREDGIYAGK RRKLEKEMCT IIH

Arabidopsis Description

FBL17F-box/LRR-repeat protein 17 [Source:UniProtKB/Swiss-Prot;Acc:Q8W104]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.