Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- nucleus 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007086.1-P | Field mustard | plastid | 96.25 | 92.93 |
| CDX78253 | Canola | plastid | 91.96 | 91.8 |
| CDY64339 | Canola | plastid | 79.46 | 78.62 |
| AT3G54650.1 | Thale cress | plastid | 81.61 | 77.07 |
| CDY55831 | Canola | mitochondrion | 64.64 | 72.98 |
| VIT_07s0141g00330.t01 | Wine grape | plastid | 61.96 | 60.45 |
| KRH71335 | Soybean | nucleus | 60.71 | 57.63 |
| PGSC0003DMT400051898 | Potato | cytosol | 60.36 | 57.29 |
| Solyc06g084060.2.1 | Tomato | cytosol, nucleus, plastid | 60.18 | 57.02 |
| KRH32101 | Soybean | nucleus | 59.64 | 56.42 |
| KRH67292 | Soybean | cytosol | 53.39 | 56.1 |
| GSMUA_Achr4P21010_001 | Banana | mitochondrion | 48.57 | 55.62 |
| Solyc09g065880.2.1 | Tomato | nucleus | 58.75 | 55.57 |
| Os03t0633400-01 | Rice | extracellular, vacuole | 33.21 | 55.36 |
| PGSC0003DMT400049672 | Potato | nucleus | 58.75 | 55.29 |
| KRG95622 | Soybean | nucleus, plastid | 58.75 | 54.83 |
| GSMUA_Achr4P28520_001 | Banana | cytosol, mitochondrion | 45.89 | 54.8 |
| GSMUA_Achr2P12640_001 | Banana | plastid | 52.86 | 52.67 |
| KRG90050 | Soybean | cytosol | 5.36 | 51.72 |
| Os12t0601000-00 | Rice | plastid | 48.75 | 48.75 |
| TraesCS5A01G378400.1 | Wheat | plastid | 48.39 | 47.88 |
| TraesCS5D01G388400.1 | Wheat | plastid | 47.86 | 47.77 |
| TraesCS5B01G382000.4 | Wheat | plastid | 44.46 | 47.43 |
| EER93780 | Sorghum | plastid | 49.11 | 46.3 |
| Zm00001d030990_P001 | Maize | cytosol | 48.57 | 45.79 |
| TraesCS5A01G058400.2 | Wheat | plastid | 48.39 | 45.32 |
| TraesCS5B01G058300.1 | Wheat | plastid | 48.21 | 45.23 |
| TraesCS5D01G069500.1 | Wheat | plastid | 47.68 | 44.8 |
| Zm00001d041414_P002 | Maize | cytosol | 47.68 | 44.5 |
| Zm00001d033321_P001 | Maize | plastid | 45.54 | 44.19 |
| OQU79521 | Sorghum | plastid | 47.5 | 43.04 |
| HORVU5Hr1G014320.7 | Barley | plastid | 48.04 | 39.39 |
| HORVU5Hr1G093590.1 | Barley | extracellular | 41.07 | 39.25 |
| HORVU5Hr1G093570.1 | Barley | plastid | 10.89 | 36.75 |
| Os03t0633100-00 | Rice | plastid | 11.07 | 30.1 |
Protein Annotations
| EnsemblPlants:CDX73462 | EnsemblPlantsGene:GSBRNA2T00108968001 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:IPR032675 | InterPro:LRR_dom_sf | PANTHER:PTHR44840 |
| PANTHER:PTHR44840:SF1 | PFAM:PF00646 | ProteinID:CDX73462 | ProteinID:CDX73462.1 | SEG:seg | SUPFAM:SSF52047 |
| SUPFAM:SSF81383 | UniParc:UPI0004EEDE4E | MapMan:19.2.2.8.1.4.6 | : | : | : |
Description
BnaC08g25410D
Coordinates
chrLK031799:+:536132..539930
Molecular Weight (calculated)
60993.1 Da
IEP (calculated)
8.415
GRAVY (calculated)
-0.067
Length
560 amino acids
Sequence
(BLAST)
(BLAST)
001: MQPQPHIPPA TANAAISAAL KSQRSRKNRG SYSCGRCGQP KKGHVCHLPP LDVPSTPIAP EPVTSIAAAA SSTRSTVVSL SSAPLRQSFT NLRRALSFDD
101: DPGRFHAVAL WEVLKRLPPS GLLMAARVCK GWRETARKMW KAAEELRIRV PKRAQIGYVG SLLQKCPGLV TLSLKLESDF DATTLACIAF SCPNLEVLEI
201: LTCGAAVNRI SGDELGRFVS NKRGLTSLKM EGCSNLGGFS LTSTSLSTLW LSDLHSLSKM IFNCPNLIEI SLEFSQQEGD STDLVTMVDG LGRTCTRLQN
301: IHIASLKLSH TVVLALTAVN FSCLRMLSLV LGIDIIDASV DAISSSYTNL ELLDLSGSSI TDTGLGMICD VLPDTLSKLL VALCPNITSS GIQFATAQLP
401: LLELMDCGMT VSDPNSDNPS TPQKTPGYNQ KMFIKHKRMK KLSLWGCSSL DALFLNCPEL KDLNLNSCNN LQPESLVIQC PKLEIVHALG CQKLLTVAIR
501: KQVSENFAAG ENHMTRKRLA DGSKRIQAPP SLYQETREDD ENYPAKKRRK IEREVCTIID
101: DPGRFHAVAL WEVLKRLPPS GLLMAARVCK GWRETARKMW KAAEELRIRV PKRAQIGYVG SLLQKCPGLV TLSLKLESDF DATTLACIAF SCPNLEVLEI
201: LTCGAAVNRI SGDELGRFVS NKRGLTSLKM EGCSNLGGFS LTSTSLSTLW LSDLHSLSKM IFNCPNLIEI SLEFSQQEGD STDLVTMVDG LGRTCTRLQN
301: IHIASLKLSH TVVLALTAVN FSCLRMLSLV LGIDIIDASV DAISSSYTNL ELLDLSGSSI TDTGLGMICD VLPDTLSKLL VALCPNITSS GIQFATAQLP
401: LLELMDCGMT VSDPNSDNPS TPQKTPGYNQ KMFIKHKRMK KLSLWGCSSL DALFLNCPEL KDLNLNSCNN LQPESLVIQC PKLEIVHALG CQKLLTVAIR
501: KQVSENFAAG ENHMTRKRLA DGSKRIQAPP SLYQETREDD ENYPAKKRRK IEREVCTIID
001: MQPQPHISPN TATAAISAAL ESQRSRKNRG SYNCGRCGQP KKGHVCLLTA PPDIPTTPIA SEPVSCISAA ASSSRSTVLS LTAAPSSRQT FTHLRRALSF
101: DDVDARNSLD ESDLDAASMD LDLQLDTDIV QPGRFHAVGL WEVLKRLPPS SLLMAARVCK GWRETSRKMW KAAEELRIRV PERAQIGYIG SLLQKCPRLI
201: RLSLKIESDF DATTLACIAF SCPNLEVLEI TTSGAAVNRI SGDELSRFVA NKRGLTSLKM EGCSNLGGFS LSSSSLSTLW LSDLHSLSKM IFNCPNLTEI
301: SLEFSRQEDD STDLVTMVDG LGRTCTRLQN IHIASLKLSH TVVLSLTAVN FRYLRMLSLV LGINITDASV AAISSGYKNL ELLDLSGSSI TDTGLGMICD
401: VLPDTLSKLL VALCPNITSS GIQFATAQLP LLELMDCGMT VSDPNSDNPT FVENPSPHKT PGYNQKMFIK HKRLKKLSLW GCSSLDALFL NCPELMDLNL
501: NLCSNLHPES LVLQCPKLQL VYASGCQGLL TGAIRKQVSE NFSAGENHMP RKRLADASKR IQALPSLYQE TREDGIYAGK RRKLEKEMCT IIH
101: DDVDARNSLD ESDLDAASMD LDLQLDTDIV QPGRFHAVGL WEVLKRLPPS SLLMAARVCK GWRETSRKMW KAAEELRIRV PERAQIGYIG SLLQKCPRLI
201: RLSLKIESDF DATTLACIAF SCPNLEVLEI TTSGAAVNRI SGDELSRFVA NKRGLTSLKM EGCSNLGGFS LSSSSLSTLW LSDLHSLSKM IFNCPNLTEI
301: SLEFSRQEDD STDLVTMVDG LGRTCTRLQN IHIASLKLSH TVVLSLTAVN FRYLRMLSLV LGINITDASV AAISSGYKNL ELLDLSGSSI TDTGLGMICD
401: VLPDTLSKLL VALCPNITSS GIQFATAQLP LLELMDCGMT VSDPNSDNPT FVENPSPHKT PGYNQKMFIK HKRLKKLSLW GCSSLDALFL NCPELMDLNL
501: NLCSNLHPES LVLQCPKLQL VYASGCQGLL TGAIRKQVSE NFSAGENHMP RKRLADASKR IQALPSLYQE TREDGIYAGK RRKLEKEMCT IIH
Arabidopsis Description
FBL17F-box/LRR-repeat protein 17 [Source:UniProtKB/Swiss-Prot;Acc:Q8W104]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.