Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- plastid 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os03t0137800-01 | |
| Os10t0471700-02 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G54650.1 | Os03t0137800-01 | AT2G32710.1 | 18948957 |
| AT3G54650.1 | Os10t0471700-02 | AT2G32710.1 | 18948957 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G093570.1 | Barley | plastid | 50.97 | 63.25 |
| Zm00001d033321_P001 | Maize | plastid | 58.74 | 20.97 |
| TraesCS5B01G382000.4 | Wheat | plastid | 51.46 | 20.19 |
| EER93780 | Sorghum | plastid | 57.77 | 20.03 |
| TraesCS5A01G378400.1 | Wheat | plastid | 52.43 | 19.08 |
| TraesCS5D01G388400.1 | Wheat | plastid | 51.94 | 19.07 |
| Os12t0601000-00 | Rice | plastid | 48.54 | 17.86 |
| VIT_07s0141g00330.t01 | Wine grape | plastid | 38.84 | 13.94 |
| KRH67292 | Soybean | cytosol | 33.01 | 12.76 |
| PGSC0003DMT400049672 | Potato | nucleus | 36.41 | 12.61 |
| Solyc09g065880.2.1 | Tomato | nucleus | 35.44 | 12.33 |
| KRH71335 | Soybean | nucleus | 34.95 | 12.2 |
| KRG95622 | Soybean | nucleus, plastid | 35.44 | 12.17 |
| GSMUA_Achr2P12640_001 | Banana | plastid | 33.01 | 12.1 |
| KRH32101 | Soybean | nucleus | 34.47 | 11.99 |
| CDY64339 | Canola | plastid | 32.52 | 11.84 |
| CDX73462 | Canola | plastid | 30.1 | 11.07 |
| AT3G54650.1 | Thale cress | plastid | 31.55 | 10.96 |
| Bra007086.1-P | Field mustard | plastid | 29.61 | 10.52 |
| CDX78253 | Canola | plastid | 28.64 | 10.52 |
| PGSC0003DMT400051898 | Potato | cytosol | 30.1 | 10.51 |
| Solyc06g084060.2.1 | Tomato | cytosol, nucleus, plastid | 30.1 | 10.49 |
| CDY55831 | Canola | mitochondrion | 23.3 | 9.68 |
| GSMUA_Achr4P28520_001 | Banana | cytosol, mitochondrion | 19.9 | 8.74 |
| Bra014802.1-P | Field mustard | plastid | 32.04 | 8.43 |
| GSMUA_Achr4P21010_001 | Banana | mitochondrion | 18.93 | 7.98 |
| HORVU5Hr1G093590.1 | Barley | extracellular | 20.39 | 7.17 |
| KRG90050 | Soybean | cytosol | 0.97 | 3.45 |
| Os03t0633400-01 | Rice | extracellular, vacuole | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os03t0633100-00 | EnsemblPlantsGene:Os03g0633100 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | PANTHER:PTHR44840 | PANTHER:PTHR44840:SF1 | PFAM:PF00646 |
| ProteinID:BAS85381.1 | SEG:seg | SUPFAM:SSF81383 | UniParc:UPI00039398C1 | UniProt:A0A0P0W160 | MapMan:35.2 |
Description
F-box protein 156Similar to Leucine Rich Repeat family protein, expressed. (Os03t0633100-00)
Coordinates
chr3:+:24189817..24190437
Molecular Weight (calculated)
21103.2 Da
IEP (calculated)
9.485
GRAVY (calculated)
-0.450
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLPKPPPP PRPKTRGSYN CGRCGLPKKG HVCAAGGPAP TPSPSSSSGA ATTTTSGGGG GGGEGTKLRR ALSFEDAATA SASATPSSPE KKPRVVPDAD
101: AVGRGGEGEV EMVEGQGGEE ELKEEEEAVE LGGRAVPREL MAEVLRRLGP RGVMAAAAVS RGWRDCAGRV WRAAEELRLR AAGVSLVGAL LPRCPALSRL
201: SLRMER
101: AVGRGGEGEV EMVEGQGGEE ELKEEEEAVE LGGRAVPREL MAEVLRRLGP RGVMAAAAVS RGWRDCAGRV WRAAEELRLR AAGVSLVGAL LPRCPALSRL
201: SLRMER
001: MQPQPHISPN TATAAISAAL ESQRSRKNRG SYNCGRCGQP KKGHVCLLTA PPDIPTTPIA SEPVSCISAA ASSSRSTVLS LTAAPSSRQT FTHLRRALSF
101: DDVDARNSLD ESDLDAASMD LDLQLDTDIV QPGRFHAVGL WEVLKRLPPS SLLMAARVCK GWRETSRKMW KAAEELRIRV PERAQIGYIG SLLQKCPRLI
201: RLSLKIESDF DATTLACIAF SCPNLEVLEI TTSGAAVNRI SGDELSRFVA NKRGLTSLKM EGCSNLGGFS LSSSSLSTLW LSDLHSLSKM IFNCPNLTEI
301: SLEFSRQEDD STDLVTMVDG LGRTCTRLQN IHIASLKLSH TVVLSLTAVN FRYLRMLSLV LGINITDASV AAISSGYKNL ELLDLSGSSI TDTGLGMICD
401: VLPDTLSKLL VALCPNITSS GIQFATAQLP LLELMDCGMT VSDPNSDNPT FVENPSPHKT PGYNQKMFIK HKRLKKLSLW GCSSLDALFL NCPELMDLNL
501: NLCSNLHPES LVLQCPKLQL VYASGCQGLL TGAIRKQVSE NFSAGENHMP RKRLADASKR IQALPSLYQE TREDGIYAGK RRKLEKEMCT IIH
101: DDVDARNSLD ESDLDAASMD LDLQLDTDIV QPGRFHAVGL WEVLKRLPPS SLLMAARVCK GWRETSRKMW KAAEELRIRV PERAQIGYIG SLLQKCPRLI
201: RLSLKIESDF DATTLACIAF SCPNLEVLEI TTSGAAVNRI SGDELSRFVA NKRGLTSLKM EGCSNLGGFS LSSSSLSTLW LSDLHSLSKM IFNCPNLTEI
301: SLEFSRQEDD STDLVTMVDG LGRTCTRLQN IHIASLKLSH TVVLSLTAVN FRYLRMLSLV LGINITDASV AAISSGYKNL ELLDLSGSSI TDTGLGMICD
401: VLPDTLSKLL VALCPNITSS GIQFATAQLP LLELMDCGMT VSDPNSDNPT FVENPSPHKT PGYNQKMFIK HKRLKKLSLW GCSSLDALFL NCPELMDLNL
501: NLCSNLHPES LVLQCPKLQL VYASGCQGLL TGAIRKQVSE NFSAGENHMP RKRLADASKR IQALPSLYQE TREDGIYAGK RRKLEKEMCT IIH
Arabidopsis Description
FBL17F-box/LRR-repeat protein 17 [Source:UniProtKB/Swiss-Prot;Acc:Q8W104]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.