Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- nucleus 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G388400.1 | Wheat | plastid | 94.48 | 88.41 |
| TraesCS5A01G378400.1 | Wheat | plastid | 94.29 | 87.46 |
| HORVU5Hr1G093570.1 | Barley | plastid | 26.29 | 83.13 |
| Os03t0633400-01 | Rice | extracellular, vacuole | 46.67 | 72.92 |
| EER93780 | Sorghum | plastid | 73.9 | 65.32 |
| HORVU5Hr1G093590.1 | Barley | extracellular | 72.19 | 64.68 |
| Zm00001d033321_P001 | Maize | plastid | 67.43 | 61.35 |
| TraesCS5B01G058300.1 | Wheat | plastid | 64.0 | 56.28 |
| GSMUA_Achr4P21010_001 | Banana | mitochondrion | 49.52 | 53.17 |
| GSMUA_Achr4P28520_001 | Banana | cytosol, mitochondrion | 46.29 | 51.81 |
| Os03t0633100-00 | Rice | plastid | 20.19 | 51.46 |
| GSMUA_Achr2P12640_001 | Banana | plastid | 55.05 | 51.42 |
| KRH67292 | Soybean | cytosol | 50.86 | 50.09 |
| VIT_07s0141g00330.t01 | Wine grape | plastid | 53.71 | 49.13 |
| CDY55831 | Canola | mitochondrion | 43.62 | 46.17 |
| CDY64339 | Canola | plastid | 49.52 | 45.94 |
| KRH71335 | Soybean | nucleus | 50.86 | 45.25 |
| Solyc06g084060.2.1 | Tomato | cytosol, nucleus, plastid | 50.48 | 44.84 |
| KRG95622 | Soybean | nucleus, plastid | 51.24 | 44.83 |
| Solyc09g065880.2.1 | Tomato | nucleus | 50.48 | 44.76 |
| PGSC0003DMT400051898 | Potato | cytosol | 50.29 | 44.75 |
| CDX73462 | Canola | plastid | 47.43 | 44.46 |
| KRH32101 | Soybean | nucleus | 50.1 | 44.43 |
| PGSC0003DMT400049672 | Potato | nucleus | 50.1 | 44.2 |
| CDX78253 | Canola | plastid | 46.86 | 43.85 |
| AT3G54650.1 | Thale cress | plastid | 49.14 | 43.51 |
| Bra007086.1-P | Field mustard | plastid | 47.62 | 43.1 |
| KRG90050 | Soybean | cytosol | 4.57 | 41.38 |
| Bra014802.1-P | Field mustard | plastid | 48.57 | 32.57 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G382000.4 | EnsemblPlantsGene:TraesCS5B01G382000 | Gene3D:1.20.1280.50 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:F-box-like_dom_sf | InterPro:IPR032675 | InterPro:LRR_dom_sf | PANTHER:PTHR44840 | SEG:seg |
| SUPFAM:SSF52047 | SUPFAM:SSF81383 | MapMan:19.2.2.8.1.4.6 | : | : | : |
Description
No Description!
Coordinates
chr5B:-:559996281..560001434
Molecular Weight (calculated)
56274.9 Da
IEP (calculated)
8.466
GRAVY (calculated)
0.006
Length
525 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSSSLPAK PPPPPRPKTR GSYNCGRCGQ PKKGHVCNLP SPAAADGGAA PPSPSPSSSG GDTRLRRALS FDEPSSPEKK PRPDHDGRTM ELGGRAVPVD
101: LVVEVLRRLG PRGVLDAAAV SRAWRDCADR VWRVAEELRL RPAAAGLLGA LLPRCAALSR LVLHMESAVD ATMLSCLAFS CSSLETLEIT MADKAINNMT
201: GEELSRLVSE KHSLSILKIG GCSNLGFLNL SSSSLNVLWL SDLCSLSESV ISCPNMSELS LCFTQQSSEC TDLVSLMDGL GRSCPNLRNL HISSIQLSNE
301: AVSALEAANL RGLCMLSLIL GSKMTDAAVA SIVRSCASLE LLDLSGSSIS DSGVGMICKA FPHTLSRLLL ALCPNITTCG IQAATAQLPL LQLMDCGMSL
401: RSNLQNEKQG AYFGEINGRI RLCPKLPTLK KQPMRQKLII KHDNLKKLSL WGCSAIDALY VKCPELIDLN LNTCTNLHPE RLLLQCPNLK NVHAFGCQDM
501: LIGAIKNQKL INRKNLMKQC VSTGV
101: LVVEVLRRLG PRGVLDAAAV SRAWRDCADR VWRVAEELRL RPAAAGLLGA LLPRCAALSR LVLHMESAVD ATMLSCLAFS CSSLETLEIT MADKAINNMT
201: GEELSRLVSE KHSLSILKIG GCSNLGFLNL SSSSLNVLWL SDLCSLSESV ISCPNMSELS LCFTQQSSEC TDLVSLMDGL GRSCPNLRNL HISSIQLSNE
301: AVSALEAANL RGLCMLSLIL GSKMTDAAVA SIVRSCASLE LLDLSGSSIS DSGVGMICKA FPHTLSRLLL ALCPNITTCG IQAATAQLPL LQLMDCGMSL
401: RSNLQNEKQG AYFGEINGRI RLCPKLPTLK KQPMRQKLII KHDNLKKLSL WGCSAIDALY VKCPELIDLN LNTCTNLHPE RLLLQCPNLK NVHAFGCQDM
501: LIGAIKNQKL INRKNLMKQC VSTGV
001: MQPQPHISPN TATAAISAAL ESQRSRKNRG SYNCGRCGQP KKGHVCLLTA PPDIPTTPIA SEPVSCISAA ASSSRSTVLS LTAAPSSRQT FTHLRRALSF
101: DDVDARNSLD ESDLDAASMD LDLQLDTDIV QPGRFHAVGL WEVLKRLPPS SLLMAARVCK GWRETSRKMW KAAEELRIRV PERAQIGYIG SLLQKCPRLI
201: RLSLKIESDF DATTLACIAF SCPNLEVLEI TTSGAAVNRI SGDELSRFVA NKRGLTSLKM EGCSNLGGFS LSSSSLSTLW LSDLHSLSKM IFNCPNLTEI
301: SLEFSRQEDD STDLVTMVDG LGRTCTRLQN IHIASLKLSH TVVLSLTAVN FRYLRMLSLV LGINITDASV AAISSGYKNL ELLDLSGSSI TDTGLGMICD
401: VLPDTLSKLL VALCPNITSS GIQFATAQLP LLELMDCGMT VSDPNSDNPT FVENPSPHKT PGYNQKMFIK HKRLKKLSLW GCSSLDALFL NCPELMDLNL
501: NLCSNLHPES LVLQCPKLQL VYASGCQGLL TGAIRKQVSE NFSAGENHMP RKRLADASKR IQALPSLYQE TREDGIYAGK RRKLEKEMCT IIH
101: DDVDARNSLD ESDLDAASMD LDLQLDTDIV QPGRFHAVGL WEVLKRLPPS SLLMAARVCK GWRETSRKMW KAAEELRIRV PERAQIGYIG SLLQKCPRLI
201: RLSLKIESDF DATTLACIAF SCPNLEVLEI TTSGAAVNRI SGDELSRFVA NKRGLTSLKM EGCSNLGGFS LSSSSLSTLW LSDLHSLSKM IFNCPNLTEI
301: SLEFSRQEDD STDLVTMVDG LGRTCTRLQN IHIASLKLSH TVVLSLTAVN FRYLRMLSLV LGINITDASV AAISSGYKNL ELLDLSGSSI TDTGLGMICD
401: VLPDTLSKLL VALCPNITSS GIQFATAQLP LLELMDCGMT VSDPNSDNPT FVENPSPHKT PGYNQKMFIK HKRLKKLSLW GCSSLDALFL NCPELMDLNL
501: NLCSNLHPES LVLQCPKLQL VYASGCQGLL TGAIRKQVSE NFSAGENHMP RKRLADASKR IQALPSLYQE TREDGIYAGK RRKLEKEMCT IIH
Arabidopsis Description
FBL17F-box/LRR-repeat protein 17 [Source:UniProtKB/Swiss-Prot;Acc:Q8W104]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.