Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0633400-01 | Rice | extracellular, vacuole | 46.59 | 81.25 |
| TraesCS5D01G388400.1 | Wheat | plastid | 74.06 | 77.36 |
| TraesCS5A01G378400.1 | Wheat | plastid | 73.38 | 75.97 |
| TraesCS5B01G382000.4 | Wheat | plastid | 64.68 | 72.19 |
| EER93780 | Sorghum | plastid | 59.39 | 58.59 |
| GSMUA_Achr4P21010_001 | Banana | mitochondrion | 47.95 | 57.46 |
| Zm00001d033321_P001 | Maize | plastid | 54.78 | 55.63 |
| GSMUA_Achr4P28520_001 | Banana | cytosol, mitochondrion | 44.2 | 55.22 |
| GSMUA_Achr2P12640_001 | Banana | plastid | 46.76 | 48.75 |
| HORVU5Hr1G014320.7 | Barley | plastid | 53.75 | 46.12 |
| KRG90050 | Soybean | cytosol | 4.44 | 44.83 |
| CDY55831 | Canola | mitochondrion | 36.86 | 43.55 |
| VIT_07s0141g00330.t01 | Wine grape | plastid | 42.15 | 43.03 |
| KRH67292 | Soybean | cytosol | 38.74 | 42.59 |
| KRG95622 | Soybean | nucleus, plastid | 42.66 | 41.67 |
| KRH71335 | Soybean | nucleus | 41.81 | 41.53 |
| CDY64339 | Canola | plastid | 39.93 | 41.34 |
| CDX73462 | Canola | plastid | 39.25 | 41.07 |
| CDX78253 | Canola | plastid | 38.91 | 40.64 |
| Solyc06g084060.2.1 | Tomato | cytosol, nucleus, plastid | 40.96 | 40.61 |
| PGSC0003DMT400051898 | Potato | cytosol | 40.78 | 40.51 |
| KRH32101 | Soybean | nucleus | 40.78 | 40.37 |
| Solyc09g065880.2.1 | Tomato | nucleus | 40.27 | 39.86 |
| PGSC0003DMT400049672 | Potato | nucleus | 40.1 | 39.5 |
| Bra007086.1-P | Field mustard | plastid | 39.08 | 39.48 |
| AT3G54650.1 | Thale cress | plastid | 39.42 | 38.95 |
| HORVU5Hr1G093570.1 | Barley | plastid | 9.39 | 33.13 |
| Bra014802.1-P | Field mustard | plastid | 39.93 | 29.89 |
| Os03t0633100-00 | Rice | plastid | 7.17 | 20.39 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G093590.1 | EnsemblPlantsGene:HORVU5Hr1G093590 | Gene3D:3.80.10.10 | InterPro:IPR032675 | InterPro:LRR_dom_sf | ncoils:Coil |
| PANTHER:PTHR44840 | SEG:seg | SUPFAM:SSF52047 | UniParc:UPI000B48653B | UniProt:A0A287SAE6 | MapMan:19.2.2.8.1.4.6 |
Description
No Description!
Coordinates
chrchr5H:-:592332253..592339772
Molecular Weight (calculated)
48987.8 Da
IEP (calculated)
7.471
GRAVY (calculated)
0.106
Length
586 amino acids
Sequence
(BLAST)
(BLAST)
001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
101: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXRGVLD AAAVSRAWRD CADRVWRVAE ELRLRPAGAG LLAALLPRCA ALSRLVLHME SDVDATMLSC
201: LAFSCSSLEI LEITMSDKAS NNMTGEELSR FVSEKHSLSI LKIGGCSNLG FLNLSSSSLN VLWLSDLYSL SESVISCPNM SELSLCFTQQ STDCTDLVSL
301: MDGLGRSCPN LRNLHISSIQ LSNEAVSALE GANLRGLCML SLILGSKMTD AAVASIVRSC ASLALLDLSG SSISDSGVGM IGKAFPHTLS RLLVALCPNI
401: TTSGIQAATV QLPLLQLMDC GMSLRSNSQN EKQGAYFGEI NGRIRLCPKL PTLKKQPMRQ KLIIKHDNLK KLSLWGCSAI DALYVKCPEL IDLNLNSCTN
501: LHAERLLLQC PNLKNVHAFG CQDMLIGAIR NQVLNEFAAA EPHLPCKRLA DGSKRVQLSQ FPQEQLPEDK IWIGFKRSEC IVHLDS
101: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXRGVLD AAAVSRAWRD CADRVWRVAE ELRLRPAGAG LLAALLPRCA ALSRLVLHME SDVDATMLSC
201: LAFSCSSLEI LEITMSDKAS NNMTGEELSR FVSEKHSLSI LKIGGCSNLG FLNLSSSSLN VLWLSDLYSL SESVISCPNM SELSLCFTQQ STDCTDLVSL
301: MDGLGRSCPN LRNLHISSIQ LSNEAVSALE GANLRGLCML SLILGSKMTD AAVASIVRSC ASLALLDLSG SSISDSGVGM IGKAFPHTLS RLLVALCPNI
401: TTSGIQAATV QLPLLQLMDC GMSLRSNSQN EKQGAYFGEI NGRIRLCPKL PTLKKQPMRQ KLIIKHDNLK KLSLWGCSAI DALYVKCPEL IDLNLNSCTN
501: LHAERLLLQC PNLKNVHAFG CQDMLIGAIR NQVLNEFAAA EPHLPCKRLA DGSKRVQLSQ FPQEQLPEDK IWIGFKRSEC IVHLDS
001: MQPQPHISPN TATAAISAAL ESQRSRKNRG SYNCGRCGQP KKGHVCLLTA PPDIPTTPIA SEPVSCISAA ASSSRSTVLS LTAAPSSRQT FTHLRRALSF
101: DDVDARNSLD ESDLDAASMD LDLQLDTDIV QPGRFHAVGL WEVLKRLPPS SLLMAARVCK GWRETSRKMW KAAEELRIRV PERAQIGYIG SLLQKCPRLI
201: RLSLKIESDF DATTLACIAF SCPNLEVLEI TTSGAAVNRI SGDELSRFVA NKRGLTSLKM EGCSNLGGFS LSSSSLSTLW LSDLHSLSKM IFNCPNLTEI
301: SLEFSRQEDD STDLVTMVDG LGRTCTRLQN IHIASLKLSH TVVLSLTAVN FRYLRMLSLV LGINITDASV AAISSGYKNL ELLDLSGSSI TDTGLGMICD
401: VLPDTLSKLL VALCPNITSS GIQFATAQLP LLELMDCGMT VSDPNSDNPT FVENPSPHKT PGYNQKMFIK HKRLKKLSLW GCSSLDALFL NCPELMDLNL
501: NLCSNLHPES LVLQCPKLQL VYASGCQGLL TGAIRKQVSE NFSAGENHMP RKRLADASKR IQALPSLYQE TREDGIYAGK RRKLEKEMCT IIH
101: DDVDARNSLD ESDLDAASMD LDLQLDTDIV QPGRFHAVGL WEVLKRLPPS SLLMAARVCK GWRETSRKMW KAAEELRIRV PERAQIGYIG SLLQKCPRLI
201: RLSLKIESDF DATTLACIAF SCPNLEVLEI TTSGAAVNRI SGDELSRFVA NKRGLTSLKM EGCSNLGGFS LSSSSLSTLW LSDLHSLSKM IFNCPNLTEI
301: SLEFSRQEDD STDLVTMVDG LGRTCTRLQN IHIASLKLSH TVVLSLTAVN FRYLRMLSLV LGINITDASV AAISSGYKNL ELLDLSGSSI TDTGLGMICD
401: VLPDTLSKLL VALCPNITSS GIQFATAQLP LLELMDCGMT VSDPNSDNPT FVENPSPHKT PGYNQKMFIK HKRLKKLSLW GCSSLDALFL NCPELMDLNL
501: NLCSNLHPES LVLQCPKLQL VYASGCQGLL TGAIRKQVSE NFSAGENHMP RKRLADASKR IQALPSLYQE TREDGIYAGK RRKLEKEMCT IIH
Arabidopsis Description
FBL17F-box/LRR-repeat protein 17 [Source:UniProtKB/Swiss-Prot;Acc:Q8W104]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.