Factsheet for Os03t0137800-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus

Predictor Summary:

nucleus 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0123100-01
Os02t0325100-01
Os03t0203800-01	nucleus
Os03t0208700-00	nucleus
Os03t0208800-00	nucleus
Os03t0607600-00	nucleus
Os03t0617500-01	nucleus
Os03t0633100-00
Os03t0633400-01
Os04t0376500-01
Os04t0443300-00
Os06t0236600-00	endoplasmic reticulum
Os07t0556000-01	nucleus
Os09t0111100-01	nucleus
Os09t0382300-00	endoplasmic reticulum
Os12t0502300-01	nucleus
Os12t0581800-01	nucleus
Os12t0588800-01	nucleus
Os12t0601000-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G32710.1	Os04t0376500-01	AT1G10840.1	20706207
AT2G32710.1	Os06t0236600-00	AT1G70210.1	20407024
AT2G32710.1	Os09t0382300-00	AT1G70210.1	20407024
AT2G32710.1	Os04t0443300-00	AT1G71380.1	20706207
AT2G32710.1	Os12t0502300-01	AT1G80370.1	20407024
AT2G32710.1	Os02t0123100-01	AT3G48750.1	11449057
AT2G32710.1	Os02t0123100-01	AT3G48750.1	20706207
AT2G32710.1	Os03t0633100-00	AT3G54650.1	18948957
AT2G32710.1	Os03t0633400-01	AT3G54650.1	18948957
AT2G32710.1	Os12t0601000-00	AT3G54650.1	18948957
AT2G32710.1	Os07t0556000-01	AT4G03270.1	20407024
AT2G32710.1	Os09t0111100-01	AT4G34160.1	20407024
AT2G32710.1	Os03t0203800-01	AT4G37630.1	20407024
AT2G32710.1	Os03t0617500-01	AT4G37630.1	20407024
AT2G32710.1	Os12t0588800-01	AT4G37630.1	20407024
AT2G32710.1	Os03t0208700-00	AT5G43080.1	20407024
AT2G32710.1	Os03t0208800-00	AT5G43080.1	20407024
AT2G32710.1	Os03t0607600-00	AT5G43080.1	20407024
AT2G32710.1	Os12t0581800-01	AT5G43080.1	20407024
AT2G32710.1	Os02t0325100-01	AT5G58290.1	20706207

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G064490.1	Barley	nucleus	23.53	72.22
EER95545	Sorghum	nucleus	67.42	69.95
Zm00001d048363_P001	Maize	nucleus	67.42	69.3
Zm00001d027585_P001	Maize	nucleus	65.61	68.08
TraesCS5A01G506500.1	Wheat	nucleus	59.73	63.16
HORVU5Hr1G031690.1	Barley	extracellular	29.41	59.09
Os10t0471700-02	Rice	nucleus	50.68	57.73
TraesCS4D01G332500.1	Wheat	nucleus	55.2	55.71
HORVU3Hr1G064580.1	Barley	nucleus	32.58	54.96
GSMUA_Achr8P12510_001	Banana	cytosol, mitochondrion, nucleus, plastid	46.61	53.65
GSMUA_Achr5P20430_001	Banana	nucleus	44.8	52.11
GSMUA_Achr11P...	Banana	nucleus	46.15	51.0
GSMUA_Achr2P11790_001	Banana	nucleus	46.61	50.74
GSMUA_Achr1P00900_001	Banana	nucleus	41.63	48.68
GSMUA_Achr11P...	Banana	nucleus	40.27	47.34
GSMUA_Achr5P12920_001	Banana	nucleus	43.44	43.44
KRG92238	Soybean	nucleus	42.08	41.52
GSMUA_Achr4P26490_001	Banana	nucleus	39.82	40.37
PGSC0003DMT400019919	Potato	nucleus	42.08	39.74
Solyc12g098310.1.1	Tomato	nucleus	41.63	39.66
HORVU4Hr1G080410.1	Barley	nucleus	66.06	39.14
VIT_05s0029g00040.t01	Wine grape	nucleus	44.8	38.22
Solyc09g091780.2.1	Tomato	nucleus	36.2	38.1
PGSC0003DMT400076291	Potato	nucleus	35.75	37.8
Bra021808.1-P	Field mustard	nucleus	37.56	34.58
CDY19160	Canola	nucleus	38.01	34.57
CDY59640	Canola	nucleus	19.0	33.33
Bra022897.1-P	Field mustard	nucleus	37.56	33.2
CDY23793	Canola	nucleus	36.2	32.79
Bra005565.1-P	Field mustard	nucleus	33.48	32.74
CDX84726	Canola	nucleus	36.2	32.39
CDX79470	Canola	nucleus	36.2	32.26
CDY12181	Canola	nucleus	34.84	32.22
AT2G32710.1	Thale cress	nucleus	39.82	30.45

Protein Annotations

MapMan:13.1.1.3.1	Gene3D:4.10.365.10	EntrezGene:4331554	ProteinID:ABF93871.1	EMBL:AK064723	ProteinID:BAF10819.1
ProteinID:BAS82200.1	InterPro:CDI	EMBL:DQ229366	ProteinID:EAZ25508.1	GO:GO:0003674	GO:GO:0004860
GO:GO:0004861	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464
GO:GO:0006469	GO:GO:0007049	GO:GO:0007050	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0019538	GO:GO:0030234	GO:GO:0071901	EnsemblPlantsGene:Os03g0137800	EnsemblPlants:Os03t0137800-01	PFAM:PF02234
PIRSF:PIRSF017811	PANTHER:PTHR10265	PANTHER:PTHR10265:SF23	UniProt:Q283L0	UniParc:UPI00006C9407	RefSeq:XP_015629111.1
SEG:seg	:	:	:	:	:

Description

KIP-RELATED PROTEIN 5Cyclin-dependent kinase inhibitor family protein. (Os03t0137800-01)

Coordinates

chr3:+:2088673..2091654

Molecular Weight (calculated)

24178.5 Da

IEP (calculated)

7.253

GRAVY (calculated)

-0.673

Length

221 amino acids

Sequence
(BLAST)

001: MGKYMRKGKV SGEVAVMEVG GALLGVRTRS RTLALQRTTS SQKPPEKGEG DPGAGAGAGA EYLELRSRRL EKPPPHTPPA KEKETARRAS AAAAAAVRMP
101: AAPQAAEEFE AEVEVSFGDN VLDLDGDAME RSTRETTPCS LIRSSEMIST PGSTTKTNTS ISSRRRMETS VCRYVPSSLE MEEFFAAAEQ QQHQAFRERY
201: NFCPVNDCPL PGRYEWTRLD C

Best Arabidopsis Sequence Match ( AT5G48820.1 )
(BLAST)

001: MGKYMKKSKI TGDISVMEVS KATAPSPGVR TRAAKTLALK RLNSSAADSA LPNDSSCYLQ LRSRRLEKPS SLIEPKQPPR VHRSGIKESG SRSRVDSVNS
101: VPVAQSSNED ECFDNFVSVQ VSCGENSLGF ESRHSTREST PCNFVEDMEI MVTPGSSTRS MCRATKEYTR EQDNVIPTTS EMEEFFAYAE QQQQRLFMEK
201: YNFDIVNDIP LSGRYEWVQV KP

Arabidopsis Description

KRP3Inhibitor/interactor with cyclin-dependent kinase [Source:UniProtKB/TrEMBL;Acc:F4K388]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.