Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19935 | Canola | nucleus | 89.06 | 87.24 |
| Bra037459.1-P | Field mustard | nucleus | 66.67 | 61.84 |
| VIT_07s0005g06340.t01 | Wine grape | nucleus | 56.25 | 49.54 |
| AT5G48820.2 | Thale cress | endoplasmic reticulum, nucleus, plasma membrane, plastid | 60.94 | 48.75 |
| Solyc09g061280.2.1 | Tomato | nucleus | 45.83 | 46.81 |
| PGSC0003DMT400045507 | Potato | nucleus | 46.35 | 44.95 |
| Bra013240.1-P | Field mustard | nucleus | 41.67 | 40.2 |
| Bra021808.1-P | Field mustard | nucleus | 41.15 | 32.92 |
| Bra005565.1-P | Field mustard | nucleus | 38.54 | 32.74 |
| Bra022897.1-P | Field mustard | nucleus | 40.1 | 30.8 |
Protein Annotations
| MapMan:13.1.1.3.1 | Gene3D:4.10.365.10 | EnsemblPlantsGene:Bra036159 | EnsemblPlants:Bra036159.1 | EnsemblPlants:Bra036159.1-P | InterPro:CDI |
| GO:GO:0003674 | GO:GO:0004860 | GO:GO:0004861 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006464 | GO:GO:0006469 | GO:GO:0007049 | GO:GO:0007050 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0030234 | GO:GO:0071901 | UniProt:M4F505 |
| PFAM:PF02234 | PIRSF:PIRSF017811 | PANTHER:PTHR10265 | PANTHER:PTHR10265:SF23 | UniParc:UPI0002541EC1 | SEG:seg |
Description
AT5G48820 (E=3e-061) KRP3, ICK6 | ICK6 (INHIBITOR/INTERACTOR WITH CYCLIN-DEPENDENT KINASE); cyclin binding / cyclin-dependent protein kinase inhibitor
Coordinates
chrA09:-:2390624..2392033
Molecular Weight (calculated)
21412.1 Da
IEP (calculated)
6.024
GRAVY (calculated)
-0.664
Length
192 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKYIKKSKI TGDIDSMEAT EATSLGVRTR AAAKTLALKR LNSSSAPDSS CYLQLRSRRL EKPPSLVEPK QTPRQLKEPG SKIDSVNSSV AGSGDECFCG
101: ENSLEFQTRQ STRESTPCNF VEDLETIVTP GSSTRSMRTP TRDSTVPTIG ELEEFFAYAE HQQQRLFMDK YNFDIVNDVP LTGRYEWVQV SP
101: ENSLEFQTRQ STRESTPCNF VEDLETIVTP GSSTRSMRTP TRDSTVPTIG ELEEFFAYAE HQQQRLFMDK YNFDIVNDVP LTGRYEWVQV SP
001: MGKYMKKSKI TGDISVMEVS KATAPSPGVR TRAAKTLALK RLNSSAADSA LPNDSSCYLQ LRSRRLEKPS SLIEPKQPPR VHRSGIKESG SRSRVDSVNS
101: VPVAQSSNED ECFDNFVSVQ VSCGENSLGF ESRHSTREST PCNFVEDMEI MVTPGSSTRS MCRATKEYTR EQDNVIPTTS EMEEFFAYAE QQQQRLFMEK
201: YNFDIVNDIP LSGRYEWVQV KP
101: VPVAQSSNED ECFDNFVSVQ VSCGENSLGF ESRHSTREST PCNFVEDMEI MVTPGSSTRS MCRATKEYTR EQDNVIPTTS EMEEFFAYAE QQQQRLFMEK
201: YNFDIVNDIP LSGRYEWVQV KP
Arabidopsis Description
KRP3Inhibitor/interactor with cyclin-dependent kinase [Source:UniProtKB/TrEMBL;Acc:F4K388]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.