Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d003439_P001 | nucleus |
| Zm00001d005293_P001 | nucleus |
| Zm00001d013728_P001 | nucleus |
| Zm00001d013744_P001 | nucleus |
| Zm00001d014756_P006 | nucleus |
| Zm00001d015886_P002 | |
| Zm00001d018128_P001 | nucleus |
| Zm00001d019696_P001 | nucleus |
| Zm00001d020353_P001 | endoplasmic reticulum |
| Zm00001d021745_P001 | nucleus |
| Zm00001d023732_P002 | nucleus |
| Zm00001d025185_P001 | |
| Zm00001d025193_P003 | |
| Zm00001d025475_P001 | |
| Zm00001d027373_P003 | |
| Zm00001d028092_P001 | nucleus |
| Zm00001d030849_P001 | nucleus |
| Zm00001d030894_P002 | nucleus |
| Zm00001d030990_P001 | |
| Zm00001d033321_P001 | |
| Zm00001d033330_P001 | nucleus |
| Zm00001d033365_P002 | nucleus |
| Zm00001d041334_P001 | nucleus |
| Zm00001d041345_P001 | nucleus |
| Zm00001d041414_P002 | |
| Zm00001d048127_P001 | nucleus |
| Zm00001d048143_P003 | nucleus |
| Zm00001d048497_P002 | |
| Zm00001d050616_P002 | |
| Zm00001d052185_P001 | nucleus |
| Zm00001d053930_P001 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d014046_P001 | Maize | nucleus | 51.03 | 51.56 |
| GSMUA_Achr11P... | Banana | nucleus | 33.51 | 32.5 |
| Zm00001d048363_P001 | Maize | nucleus | 35.57 | 32.09 |
| GSMUA_Achr5P20430_001 | Banana | nucleus | 30.93 | 31.58 |
| Zm00001d027585_P001 | Maize | nucleus | 34.54 | 31.46 |
| GSMUA_Achr8P12510_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 30.93 | 31.25 |
| GSMUA_Achr11P... | Banana | nucleus | 28.87 | 29.79 |
| GSMUA_Achr1P00900_001 | Banana | nucleus | 27.84 | 28.57 |
| GSMUA_Achr2P11790_001 | Banana | nucleus | 28.87 | 27.59 |
| PGSC0003DMT400076291 | Potato | nucleus | 28.35 | 26.32 |
| GSMUA_Achr5P12920_001 | Banana | nucleus | 29.38 | 25.79 |
| Solyc09g091780.2.1 | Tomato | nucleus | 27.84 | 25.71 |
| KRG92238 | Soybean | nucleus | 29.38 | 25.45 |
| Solyc12g098310.1.1 | Tomato | nucleus | 29.9 | 25.0 |
| PGSC0003DMT400019919 | Potato | nucleus | 29.9 | 24.79 |
| Bra005565.1-P | Field mustard | nucleus | 26.8 | 23.01 |
| GSMUA_Achr4P26490_001 | Banana | nucleus | 25.77 | 22.94 |
| Bra021808.1-P | Field mustard | nucleus | 27.84 | 22.5 |
| CDY23793 | Canola | nucleus | 27.84 | 22.13 |
| CDY12181 | Canola | nucleus | 26.8 | 21.76 |
| CDY19160 | Canola | nucleus | 26.8 | 21.4 |
| VIT_05s0029g00040.t01 | Wine grape | nucleus | 28.35 | 21.24 |
| CDX79470 | Canola | nucleus | 26.8 | 20.97 |
| Bra022897.1-P | Field mustard | nucleus | 26.29 | 20.4 |
| CDX84726 | Canola | nucleus | 25.77 | 20.24 |
| AT2G32710.1 | Thale cress | nucleus | 27.32 | 18.34 |
| CDY59640 | Canola | nucleus | 11.34 | 17.46 |
Protein Annotations
| MapMan:13.1.1.3.1 | EntrezGene:606440 | UniProt:A0A1D6KTN3 | InterPro:CDI | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004861 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 |
| GO:GO:0007049 | GO:GO:0007050 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 |
| GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0030234 | GO:GO:0071901 | ProteinID:ONM05944.1 |
| PANTHER:PTHR10265 | PANTHER:PTHR10265:SF41 | UniParc:UPI000843DE33 | EnsemblPlantsGene:Zm00001d032732 | EnsemblPlants:Zm00001d032732_P002 | EnsemblPlants:Zm00001d032732_T002 |
| SEG:seg | : | : | : | : | : |
Description
cyclin-dependent kinase inhibitor1 cyclin-dependent kinase inhibitor1
Coordinates
chr1:+:236508556..236509902
Molecular Weight (calculated)
21087.3 Da
IEP (calculated)
10.541
GRAVY (calculated)
-0.450
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKYMRKAKA SSEVVIMDVA AAPLGVRTRA RALALQRLQE QQTQWEEGAG GEYLELRNRR LEKLPPPPAT TRRSGGRKAA AEAAATKEAE ASYGENMLEL
101: EAMERRKRAV GTGTPQNLFY QSKALTFREK FLCSAPEKAP SALTTTSFLA WVSLSLTSHN WPVTSVGSGS RGNGMSLQGL FLGHDPKLAP PLNV
101: EAMERRKRAV GTGTPQNLFY QSKALTFREK FLCSAPEKAP SALTTTSFLA WVSLSLTSHN WPVTSVGSGS RGNGMSLQGL FLGHDPKLAP PLNV
001: MGKYIKKSKV AGAVSVKDKS HPPALGFRTR AAAAKNLALH RLRSHSDEAD SFNYLQLRSR RLVKLPLLTN TRKQQKQQLI PSVNQCQTKN PRASSGPAKK
101: LEPDTTTEEA CGDNERISRS DCNFGDKGFD LESENRSMIS DSKSIQSEIE DFFASAEQQQ QRFFIQKYNF DIVSDNPLPG RYEWVKVMP
101: LEPDTTTEEA CGDNERISRS DCNFGDKGFD LESENRSMIS DSKSIQSEIE DFFASAEQQQ QRFFIQKYNF DIVSDNPLPG RYEWVKVMP
Arabidopsis Description
KRP5Cyclin-dependent kinase inhibitor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRY0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.