Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os08t0151400-01 | Rice | cytosol, nucleus | 46.15 | 93.75 |
| GSMUA_Achr10P... | Banana | cytosol | 16.92 | 88.0 |
| TraesCS7D01G299900.1 | Wheat | cytosol, mitochondrion | 59.23 | 87.5 |
| TraesCS7B01G204700.1 | Wheat | unclear | 59.23 | 87.5 |
| TraesCS7A01G304400.1 | Wheat | cytosol, mitochondrion | 59.23 | 87.5 |
| Zm00001d008916_P001 | Maize | mitochondrion | 56.92 | 84.09 |
| EES00066 | Sorghum | cytosol, mitochondrion | 56.92 | 84.09 |
| VIT_17s0000g03570.t01 | Wine grape | cytosol, mitochondrion | 54.62 | 80.68 |
| Solyc06g072280.2.1 | Tomato | nucleus | 54.62 | 80.68 |
| PGSC0003DMT400069582 | Potato | cytosol, mitochondrion | 54.62 | 80.68 |
| GSMUA_Achr2P04990_001 | Banana | cytosol, mitochondrion | 54.62 | 80.68 |
| KRH18975 | Soybean | nucleus | 53.85 | 79.55 |
| Solyc03g098470.2.1 | Tomato | cytosol, mitochondrion | 53.85 | 79.55 |
| AT2G18740.1 | Thale cress | cytosol, mitochondrion | 53.85 | 79.55 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion | 53.85 | 79.55 |
| CDY59607 | Canola | cytosol, mitochondrion | 52.31 | 79.07 |
| CDY29245 | Canola | cytosol, mitochondrion | 52.31 | 79.07 |
| Bra024458.1-P | Field mustard | cytosol, mitochondrion | 52.31 | 79.07 |
| KRH53956 | Soybean | cytosol, mitochondrion | 53.08 | 78.41 |
| KRH63981 | Soybean | nucleus | 53.08 | 78.41 |
| KRH02922 | Soybean | nucleus | 53.08 | 78.41 |
| PGSC0003DMT400065677 | Potato | cytosol, mitochondrion | 53.08 | 78.41 |
| CDY49311 | Canola | cytosol, mitochondrion | 53.08 | 78.41 |
| CDY13008 | Canola | cytosol, mitochondrion | 51.54 | 77.91 |
| AT4G30330.1 | Thale cress | cytosol, mitochondrion | 52.31 | 77.27 |
| PGSC0003DMT400026313 | Potato | mitochondrion | 51.54 | 71.28 |
| CDY52576 | Canola | cytosol | 41.54 | 56.25 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G072420.4 | EnsemblPlantsGene:HORVU7Hr1G072420 | Gene3D:2.30.30.100 | GO:GO:0000398 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005681 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | InterPro:LSM_dom_euk/arc | InterPro:LSM_dom_sf | InterPro:snRNP-E | PANTHER:PTHR11193 | PFAM:PF01423 |
| SMART:SM00651 | SUPFAM:SSF50182 | UniParc:UPI000B470BE6 | UniProt:A0A287WUQ8 | MapMan:16.4.2.5 | : |
Description
No Description!
Coordinates
chrchr7H:+:404317975..404320750
Molecular Weight (calculated)
14949.4 Da
IEP (calculated)
9.374
GRAVY (calculated)
-0.192
Length
130 amino acids
Sequence
(BLAST)
(BLAST)
001: GVHEGPAYHD PAHRTLPYPL PRVCSPSPFA SIVPNVLALF FCCCCDGRRI LGTRRQNLIF RFLQSKARIQ IWLFEQKDMR IEGRIIGFDE YMNLVLEDAE
101: EINIKKNTRK SLGRILLKGD NITLMMNTGK
101: EINIKKNTRK SLGRILLKGD NITLMMNTGK
1: MASTKVQRIM TQPINLIFRF LQSKARIQIW LFEQKDLRIE GRITGFDEYM NLVLDEAEEV SIKKNTRKPL GRILLKGDNI TLMMNTGK
Arabidopsis Description
Putative small nuclear ribonucleoprotein E [Source:UniProtKB/TrEMBL;Acc:Q9ZV45]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.