Factsheet for HORVU2Hr1G084190.4

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 1
extracellular 3
golgi 5
plasma membrane 3
endoplasmic reticulum 3
vacuole 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	nucleus, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G345800.1	Wheat	golgi	96.16	96.39
TraesCS2B01G364200.1	Wheat	golgi	95.44	95.9
TraesCS2D01G344500.1	Wheat	golgi	94.24	94.7
Os04t0487100-01	Rice	mitochondrion	88.49	87.86
EES11025	Sorghum	golgi	86.09	86.3
PGSC0003DMT400068730	Potato	cytosol	11.99	81.97
PGSC0003DMT400023756	Potato	cytosol	52.04	80.67
Zm00001d003246_P001	Maize	golgi	83.45	72.65
KRH44609	Soybean	nucleus	71.22	72.44
CDY37314	Canola	extracellular, golgi	69.54	70.73
CDY27540	Canola	extracellular, golgi	69.3	70.49
VIT_14s0171g00320.t01	Wine grape	extracellular, golgi	71.22	70.21
VIT_09s0054g00620.t01	Wine grape	golgi	71.46	69.95
CDY32405	Canola	golgi	70.26	69.93
Solyc03g123910.2.1	Tomato	extracellular	68.59	69.93
CDX82217	Canola	golgi	69.78	69.78
Bra023903.1-P	Field mustard	extracellular, golgi	68.59	69.76
Bra001812.1-P	Field mustard	golgi	69.3	69.3
AT1G51540.1	Thale cress	endoplasmic reticulum, golgi, vacuole	67.63	67.95
HORVU7Hr1G074530.9	Barley	plastid	66.67	67.64
Solyc02g093910.2.1	Tomato	extracellular, golgi	62.11	62.11
PGSC0003DMT400052239	Potato	extracellular, golgi	61.87	61.58
KRH07016	Soybean	endoplasmic reticulum, golgi	62.83	60.37
CDY13692	Canola	endoplasmic reticulum, golgi	60.91	59.91
Bra025259.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion	59.95	58.96
AT3G27220.1	Thale cress	endoplasmic reticulum, golgi, mitochondrion, plastid	59.95	58.69
KRG94441	Soybean	plastid	62.83	58.35
CDX83669	Canola	endoplasmic reticulum, golgi	59.47	58.22
CDY21813	Canola	mitochondrion	12.47	50.49
CDY13125	Canola	cytosol	41.73	46.77
GSMUA_Achr6P28410_001	Banana	nucleus	79.86	42.15
Bra027529.1-P	Field mustard	cytosol	29.26	37.77

Protein Annotations

EnsemblPlants:HORVU2Hr1G084190.4	EnsemblPlantsGene:HORVU2Hr1G084190	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	PANTHER:PTHR24413	PANTHER:PTHR24413:SF224	PFAM:PF13418	SEG:seg
SUPFAM:SSF117281	TMHMM:TMhelix	UniParc:UPI000B4772BF	UniProt:A0A287IQ15	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr2H:+:610406716..610410655

Molecular Weight (calculated)

46587.1 Da

IEP (calculated)

8.802

GRAVY (calculated)

-0.296

Length

417 amino acids

Sequence
(BLAST)

001: MARPAAKALP PKHLVALAVV AILGLFLVAD YLWASSRSAA SSIWPSRLDI STRPAVSPPP SAEKQTKGNT STGSIDISPT FADLPAPELQ WEEMAEAPVP
101: RLDGAAIQIK NLLFVFAGYG TINYVVHSHV DIYNFSDNTW GGKFDMPKEM AHSHLGMVTD GRFIYVVTGQ YGPQCRGPTA RNFVLDTERK EWHDLPPLPV
201: PRYAPATQLW RGRLHVMGGS KEDRHEPGLE HWSLAVKDGK ALEQEWRSEI PIPRGGPHRA CVVANDKLLV IGGQEGDFMA KPGSPIFKCV RRSEIVYSDV
301: YMLDDEMKWK ELPPMPKPDS HIEFAWTNVN NSLIIAGGTT EKHPINKKMT LVGEVFRFNL ETLEWSVIGR LPFRIKTTLV GYWDGWLYFT SGQRDKGPSN
401: PSPKKVVGCM WRTKLHL

Best Arabidopsis Sequence Match ( AT1G51540.1 )
(BLAST)

001: MVRKQKYGKV VLVSCIALLA TGLIADFLWA TSHRFSSAAI SAGLSLPSSL TTVIVPGQEK DTKKKKDSVK ERKLSNTFQD LPAPELKWEK MAASPVPRLD
101: GAAIQIRDLL YVFAGYGTID LVHSHVDIYN FTDNSWGGRF NMPKDMAHSH LGMVTDGRYI YIVTGQFGPQ CRGPTAKTFV LDTDTNTWKD FVPLPVPRYA
201: PATQLWRGRL HVMGGSKENR FTPGLEHWSI AVKDGKSLEN EWRSEIPIPR GGPHRACVVV DDRLFVIGGQ EGDFMAKPGS PIFKCSRRME VVFSDVYMLD
301: EEMKWKVMPP MPKPDSHIEF AWKVVNNSIV IVGGTTEKHP ETKKMVLVGE IFQFNLNTLK WYVIGKLPYR VKTTLAGYWD GQLYFTSGQR DKGPDDPAPR
401: KVMAEMWRTK LILNP

Arabidopsis Description

At1g51540 [Source:UniProtKB/TrEMBL;Acc:Q84VX7]
SUBAcon: [golgi,endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.