Factsheet for Os04t0487100-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 1
nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G084190.4	Barley	golgi	87.86	88.49
EES11025	Sorghum	golgi	87.62	88.46
TraesCS2A01G345800.1	Wheat	golgi	87.14	87.98
TraesCS2D01G344500.1	Wheat	golgi	85.95	86.99
TraesCS2B01G364200.1	Wheat	golgi	85.71	86.75
PGSC0003DMT400068730	Potato	cytosol	12.14	83.61
PGSC0003DMT400023756	Potato	cytosol	51.9	81.04
Zm00001d003246_P001	Maize	golgi	84.76	74.32
KRH44609	Soybean	nucleus	71.43	73.17
CDY27540	Canola	extracellular, golgi	71.19	72.93
CDY37314	Canola	extracellular, golgi	71.19	72.93
Bra023903.1-P	Field mustard	extracellular, golgi	70.24	71.95
CDX82217	Canola	golgi	71.43	71.94
Os08t0128000-01	Rice	golgi	69.76	71.46
Bra001812.1-P	Field mustard	golgi	70.95	71.46
Solyc03g123910.2.1	Tomato	extracellular	69.05	70.9
CDY32405	Canola	golgi	70.71	70.88
AT1G51540.1	Thale cress	endoplasmic reticulum, golgi, vacuole	69.52	70.36
VIT_09s0054g00620.t01	Wine grape	golgi	70.95	69.95
VIT_14s0171g00320.t01	Wine grape	extracellular, golgi	70.0	69.5
Solyc02g093910.2.1	Tomato	extracellular, golgi	62.14	62.59
PGSC0003DMT400052239	Potato	extracellular, golgi	62.14	62.29
CDY13692	Canola	endoplasmic reticulum, golgi	61.43	60.85
KRH07016	Soybean	endoplasmic reticulum, golgi	62.62	60.6
Bra025259.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion	60.71	60.14
AT3G27220.1	Thale cress	endoplasmic reticulum, golgi, mitochondrion, plastid	60.95	60.09
CDX83669	Canola	endoplasmic reticulum, golgi	60.48	59.62
KRG94441	Soybean	plastid	62.62	58.57
CDY21813	Canola	mitochondrion	13.1	53.4
CDY13125	Canola	cytosol	41.9	47.31
GSMUA_Achr6P28410_001	Banana	nucleus	80.0	42.53
Bra027529.1-P	Field mustard	cytosol	30.0	39.01

Protein Annotations

Gene3D:2.120.10.80	MapMan:35.1	EntrezGene:4336220	EMBL:AK106016	ProteinID:BAF15057.1	ProteinID:BAS89804.1
ProteinID:CAE02056.2	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0019005	GO:GO:0019538	GO:GO:0030162	GO:GO:0031625	GO:GO:0043161	InterPro:IPR015915
InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	EnsemblPlantsGene:Os04g0487100	EnsemblPlants:Os04t0487100-01	PFAM:PF13418	PFAM:PF13964
PANTHER:PTHR24413	PANTHER:PTHR24413:SF224	UniProt:Q7XSB4	SMART:SM00612	SUPFAM:SSF117281	TMHMM:TMhelix
UniParc:UPI000021C806	RefSeq:XP_015635808.1	SEG:seg	:	:	:

Description

Galactose oxidase/kelch, beta-propeller domain containing protein. (Os04t0487100-01)

Coordinates

chr4:+:24339609..24343781

Molecular Weight (calculated)

46621.3 Da

IEP (calculated)

9.360

GRAVY (calculated)

-0.271

Length

420 amino acids

Sequence
(BLAST)

001: MARPAATAAA PKAPPPKHLI ALAVVAILGL VLVADFLWAS SSPAAPAWSS RIDLPGRPAA LVPPSGKKQT KEKISIGSTD INATFADLPA PELQWEEMAE
101: APVPRLDGAA MQIKNLLYVF AGYGTINHVH SHVDIYNFSD NTWGGRFDMP KEMAHSHLGM VTDGRYVYVV TGQYGPQCRG PTARNFVLDT ETKEWHDLPP
201: LPVPRYAPAT QLWRGRLHVM GGSKEDRHEP GLEHWSIAVK DGKALENEWR SEVPIPRGGP HRACVVANDK LLVIGGQEGD FMAKPGSPIF KCVRRSEVVY
301: SNVYMLDDGM KWKEFPPMPK PDSHIEFAWV NVNNSLIIAG GTTEKHPITK KMVLVGEVFR FNLNTLEWTV IGRLPFRIKT TLVGYWDGWL YFTSGQRDKG
401: PKDPSPKKVV GCMWRTKLHL

Best Arabidopsis Sequence Match ( AT1G51540.1 )
(BLAST)

001: MVRKQKYGKV VLVSCIALLA TGLIADFLWA TSHRFSSAAI SAGLSLPSSL TTVIVPGQEK DTKKKKDSVK ERKLSNTFQD LPAPELKWEK MAASPVPRLD
101: GAAIQIRDLL YVFAGYGTID LVHSHVDIYN FTDNSWGGRF NMPKDMAHSH LGMVTDGRYI YIVTGQFGPQ CRGPTAKTFV LDTDTNTWKD FVPLPVPRYA
201: PATQLWRGRL HVMGGSKENR FTPGLEHWSI AVKDGKSLEN EWRSEIPIPR GGPHRACVVV DDRLFVIGGQ EGDFMAKPGS PIFKCSRRME VVFSDVYMLD
301: EEMKWKVMPP MPKPDSHIEF AWKVVNNSIV IVGGTTEKHP ETKKMVLVGE IFQFNLNTLK WYVIGKLPYR VKTTLAGYWD GQLYFTSGQR DKGPDDPAPR
401: KVMAEMWRTK LILNP

Arabidopsis Description

At1g51540 [Source:UniProtKB/TrEMBL;Acc:Q84VX7]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.