Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 6
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES11025 | Sorghum | golgi | 81.42 | 93.75 |
| Os04t0487100-01 | Rice | mitochondrion | 74.32 | 84.76 |
| HORVU2Hr1G084190.4 | Barley | golgi | 72.65 | 83.45 |
| TraesCS2D01G344500.1 | Wheat | golgi | 70.77 | 81.69 |
| TraesCS2A01G345800.1 | Wheat | golgi | 70.77 | 81.49 |
| TraesCS2B01G364200.1 | Wheat | golgi | 70.56 | 81.45 |
| PGSC0003DMT400068730 | Potato | cytosol | 10.23 | 80.33 |
| PGSC0003DMT400023756 | Potato | cytosol | 43.63 | 77.7 |
| KRH44609 | Soybean | nucleus | 60.13 | 70.24 |
| CDX82217 | Canola | golgi | 60.13 | 69.06 |
| CDY27540 | Canola | extracellular, golgi | 59.08 | 69.02 |
| VIT_09s0054g00620.t01 | Wine grape | golgi | 61.38 | 69.01 |
| CDY37314 | Canola | extracellular, golgi | 58.87 | 68.78 |
| Zm00001d049630_P001 | Maize | golgi | 59.29 | 68.6 |
| Bra001812.1-P | Field mustard | golgi | 59.71 | 68.59 |
| CDY32405 | Canola | golgi | 59.92 | 68.5 |
| Bra023903.1-P | Field mustard | extracellular, golgi | 58.25 | 68.05 |
| VIT_14s0171g00320.t01 | Wine grape | extracellular, golgi | 59.92 | 67.85 |
| Solyc03g123910.2.1 | Tomato | extracellular | 57.83 | 67.73 |
| AT1G51540.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 58.46 | 67.47 |
| Solyc02g093910.2.1 | Tomato | extracellular, golgi | 52.61 | 60.43 |
| PGSC0003DMT400052239 | Potato | extracellular, golgi | 52.82 | 60.38 |
| CDX83669 | Canola | endoplasmic reticulum, golgi | 52.61 | 59.15 |
| CDY13692 | Canola | endoplasmic reticulum, golgi | 51.98 | 58.73 |
| AT3G27220.1 | Thale cress | endoplasmic reticulum, golgi, mitochondrion, plastid | 52.19 | 58.69 |
| Bra025259.1-P | Field mustard | endoplasmic reticulum, golgi, mitochondrion | 51.15 | 57.78 |
| KRH07016 | Soybean | endoplasmic reticulum, golgi | 51.36 | 56.68 |
| KRG94441 | Soybean | plastid | 51.77 | 55.23 |
| CDY21813 | Canola | mitochondrion | 11.48 | 53.4 |
| CDY13125 | Canola | cytosol | 35.91 | 46.24 |
| GSMUA_Achr6P28410_001 | Banana | nucleus | 65.97 | 40.0 |
| Bra027529.1-P | Field mustard | cytosol | 25.26 | 37.46 |
Protein Annotations
| EnsemblPlants:Zm00001d003246_P001 | EnsemblPlants:Zm00001d003246_T001 | EnsemblPlantsGene:Zm00001d003246 | EntrezGene:100286045 | Gene3D:2.120.10.80 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF224 |
| PFAM:PF13418 | ProteinID:ONM16502.1 | SEG:seg | SUPFAM:SSF117281 | TMHMM:TMhelix | UniParc:UPI00084426BC |
| UniProt:A0A1D6E7V3 | MapMan:35.1 | : | : | : | : |
Description
Galactose oxidase/kelch repeat superfamily protein
Coordinates
chr2:-:37617116..37637797
Molecular Weight (calculated)
53123.3 Da
IEP (calculated)
9.775
GRAVY (calculated)
-0.196
Length
479 amino acids
Sequence
(BLAST)
(BLAST)
001: MARPAAKARV PKHLVALAVV AILGLVLVAD YLWASSSASS SAVWSSRLNL HTGPAGSTPP VAKKIKEDKK SVGSTGINAT FADLPAPELK WEEMAEAPVA
101: RLDGAAIQIK NLLYVFAGYG TINHVHSHVD IYNFSDNTWG GRFDMPEDMA HSHLGMVTDG RFIYVVTGQY GPQCRGPTTR NFVLDTETKE WRGMPPLPVP
201: RVGWHTGCKD LEPNIFPTKI LLFRYAPATQ LWRGRLHVMG GSKEDRHEPA LEHWSLAVKD GKALEKEWRS EKPIPRGGPH RACVVANDKL LVIGGQEGDF
301: MAKPGSPIFK CVRRSEVVYS NVYMLDDGTT WKELPPMPKP DSHIEFAWVN VNNSLVIAGG TTDKHPITKK MVLVGEVFRF NLGTLEWSVI GRLPFRIKTT
401: LVGYWDGWLY FTSGQRDKGP KDPSPKKVKW VALGTVCHCH RFHSMSTSTD HARIRVKFTP VSELVLLCHS GLSLLLIKA
101: RLDGAAIQIK NLLYVFAGYG TINHVHSHVD IYNFSDNTWG GRFDMPEDMA HSHLGMVTDG RFIYVVTGQY GPQCRGPTTR NFVLDTETKE WRGMPPLPVP
201: RVGWHTGCKD LEPNIFPTKI LLFRYAPATQ LWRGRLHVMG GSKEDRHEPA LEHWSLAVKD GKALEKEWRS EKPIPRGGPH RACVVANDKL LVIGGQEGDF
301: MAKPGSPIFK CVRRSEVVYS NVYMLDDGTT WKELPPMPKP DSHIEFAWVN VNNSLVIAGG TTDKHPITKK MVLVGEVFRF NLGTLEWSVI GRLPFRIKTT
401: LVGYWDGWLY FTSGQRDKGP KDPSPKKVKW VALGTVCHCH RFHSMSTSTD HARIRVKFTP VSELVLLCHS GLSLLLIKA
001: MVRKQKYGKV VLVSCIALLA TGLIADFLWA TSHRFSSAAI SAGLSLPSSL TTVIVPGQEK DTKKKKDSVK ERKLSNTFQD LPAPELKWEK MAASPVPRLD
101: GAAIQIRDLL YVFAGYGTID LVHSHVDIYN FTDNSWGGRF NMPKDMAHSH LGMVTDGRYI YIVTGQFGPQ CRGPTAKTFV LDTDTNTWKD FVPLPVPRYA
201: PATQLWRGRL HVMGGSKENR FTPGLEHWSI AVKDGKSLEN EWRSEIPIPR GGPHRACVVV DDRLFVIGGQ EGDFMAKPGS PIFKCSRRME VVFSDVYMLD
301: EEMKWKVMPP MPKPDSHIEF AWKVVNNSIV IVGGTTEKHP ETKKMVLVGE IFQFNLNTLK WYVIGKLPYR VKTTLAGYWD GQLYFTSGQR DKGPDDPAPR
401: KVMAEMWRTK LILNP
101: GAAIQIRDLL YVFAGYGTID LVHSHVDIYN FTDNSWGGRF NMPKDMAHSH LGMVTDGRYI YIVTGQFGPQ CRGPTAKTFV LDTDTNTWKD FVPLPVPRYA
201: PATQLWRGRL HVMGGSKENR FTPGLEHWSI AVKDGKSLEN EWRSEIPIPR GGPHRACVVV DDRLFVIGGQ EGDFMAKPGS PIFKCSRRME VVFSDVYMLD
301: EEMKWKVMPP MPKPDSHIEF AWKVVNNSIV IVGGTTEKHP ETKKMVLVGE IFQFNLNTLK WYVIGKLPYR VKTTLAGYWD GQLYFTSGQR DKGPDDPAPR
401: KVMAEMWRTK LILNP
Arabidopsis Description
At1g51540 [Source:UniProtKB/TrEMBL;Acc:Q84VX7]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.