Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, endoplasmic reticulum, golgi, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83669 | Canola | endoplasmic reticulum, golgi | 85.68 | 85.68 |
| CDY13692 | Canola | endoplasmic reticulum, golgi | 84.98 | 85.38 |
| Bra025259.1-P | Field mustard | endoplasmic reticulum, golgi, mitochondrion | 84.74 | 85.14 |
| CDY21813 | Canola | mitochondrion | 16.43 | 67.96 |
| VIT_14s0171g00320.t01 | Wine grape | extracellular, golgi | 63.38 | 63.83 |
| AT1G51540.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 60.09 | 61.69 |
| Solyc02g093910.2.1 | Tomato | extracellular, golgi | 59.86 | 61.15 |
| Os04t0487100-01 | Rice | mitochondrion | 60.09 | 60.95 |
| EES11025 | Sorghum | golgi | 59.39 | 60.82 |
| PGSC0003DMT400052239 | Potato | extracellular, golgi | 59.62 | 60.62 |
| TraesCS2D01G344500.1 | Wheat | golgi | 58.69 | 60.24 |
| TraesCS2B01G364200.1 | Wheat | golgi | 58.69 | 60.24 |
| TraesCS2A01G345800.1 | Wheat | golgi | 58.69 | 60.1 |
| HORVU2Hr1G084190.4 | Barley | golgi | 58.69 | 59.95 |
| KRH07016 | Soybean | endoplasmic reticulum, golgi | 60.09 | 58.99 |
| KRG94441 | Soybean | plastid | 59.62 | 56.57 |
| Zm00001d003246_P001 | Maize | golgi | 58.69 | 52.19 |
| GSMUA_Achr6P28410_001 | Banana | nucleus | 59.39 | 32.03 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.1 | EntrezGene:822341 | UniProt:A0A178VGK2 | ProteinID:AEE77280.1 | ArrayExpress:AT3G27220 |
| EnsemblPlantsGene:AT3G27220 | RefSeq:AT3G27220 | TAIR:AT3G27220 | RefSeq:AT3G27220-TAIR-G | EnsemblPlants:AT3G27220.1 | TAIR:AT3G27220.1 |
| EMBL:AY048270 | EMBL:AY056400 | ProteinID:BAB02117.1 | EMBL:BT000591 | GO:GO:0000139 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005768 | GO:GO:0005794 | GO:GO:0005802 | GO:GO:0006091 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009061 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0019005 | GO:GO:0019538 | GO:GO:0030162 | GO:GO:0031625 | GO:GO:0042787 | GO:GO:0043161 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | RefSeq:NP_566812.1 | ProteinID:OAP04956.1 | PFAM:PF13418 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007115 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020100 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF137 | UniProt:Q9LK31 |
| SUPFAM:SSF117281 | TMHMM:TMhelix | UniParc:UPI00000AC6AA | SEG:seg | : | : |
Description
Kelch repeat-containing protein At3g27220 [Source:UniProtKB/Swiss-Prot;Acc:Q9LK31]
Coordinates
chr3:-:10051069..10053761
Molecular Weight (calculated)
48498.4 Da
IEP (calculated)
9.506
GRAVY (calculated)
-0.275
Length
426 amino acids
Sequence
(BLAST)
(BLAST)
001: MANKPDHHHH HHQSSRRLML VLYFTSVLGI GFIAAFLCLS SSIPSVSAVF SIWVPVNRPE IQIPIIDSKI VQKRSKQSND TKDHVRFLSA IFADIPAPEL
101: KWEEMESAPV PRLDGYSVQI NNLLYVFSGY GSLDYVHSHV DVFNFTDNKW CDRFHTPKEM ANSHLGIVTD GRYVYVVSGQ LGPQCRGPTS RSFVLDSFTK
201: TWLEFPSLPA PRYAPATQIW RGRLHVMGGS KENRNAVAFD HWSIAVKDGK ALDEWREEVP IPRGGPHRAC VVANDKLLVI GGQEGDFMAK PNSPIFKCSR
301: RREIFNGEVY MMDEEMKWKM LPPMPKNNSH IESAWIIVNN SIVIVGGTTD WHPVTKRLVL VGEIFRFQLD TLTWSVIGRL PYRVKTAMAG FWNGYLYFTS
401: GQRDRGPDNP QPGKVIGEMW RTKLKF
101: KWEEMESAPV PRLDGYSVQI NNLLYVFSGY GSLDYVHSHV DVFNFTDNKW CDRFHTPKEM ANSHLGIVTD GRYVYVVSGQ LGPQCRGPTS RSFVLDSFTK
201: TWLEFPSLPA PRYAPATQIW RGRLHVMGGS KENRNAVAFD HWSIAVKDGK ALDEWREEVP IPRGGPHRAC VVANDKLLVI GGQEGDFMAK PNSPIFKCSR
301: RREIFNGEVY MMDEEMKWKM LPPMPKNNSH IESAWIIVNN SIVIVGGTTD WHPVTKRLVL VGEIFRFQLD TLTWSVIGRL PYRVKTAMAG FWNGYLYFTS
401: GQRDRGPDNP QPGKVIGEMW RTKLKF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.