Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- golgi 6
- plasma membrane 4
- endoplasmic reticulum 4
- vacuole 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os04t0487100-01 | Rice | mitochondrion | 88.46 | 87.62 |
| HORVU2Hr1G084190.4 | Barley | golgi | 86.3 | 86.09 |
| PGSC0003DMT400068730 | Potato | cytosol | 12.5 | 85.25 |
| TraesCS2D01G344500.1 | Wheat | golgi | 84.62 | 84.82 |
| TraesCS2A01G345800.1 | Wheat | golgi | 84.13 | 84.13 |
| TraesCS2B01G364200.1 | Wheat | golgi | 83.41 | 83.61 |
| PGSC0003DMT400023756 | Potato | cytosol | 53.12 | 82.16 |
| Zm00001d003246_P001 | Maize | golgi | 93.75 | 81.42 |
| KRH44609 | Soybean | nucleus | 71.88 | 72.93 |
| VIT_09s0054g00620.t01 | Wine grape | golgi | 73.56 | 71.83 |
| CDY27540 | Canola | extracellular, golgi | 70.43 | 71.46 |
| CDY37314 | Canola | extracellular, golgi | 70.43 | 71.46 |
| CDX82217 | Canola | golgi | 71.63 | 71.46 |
| Solyc03g123910.2.1 | Tomato | extracellular | 70.19 | 71.39 |
| Bra023903.1-P | Field mustard | extracellular, golgi | 69.95 | 70.98 |
| Bra001812.1-P | Field mustard | golgi | 70.91 | 70.74 |
| VIT_14s0171g00320.t01 | Wine grape | extracellular, golgi | 71.88 | 70.69 |
| CDY32405 | Canola | golgi | 71.15 | 70.64 |
| AT1G51540.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 69.71 | 69.88 |
| OQU79823 | Sorghum | golgi | 67.55 | 68.7 |
| Solyc02g093910.2.1 | Tomato | extracellular, golgi | 63.22 | 63.07 |
| PGSC0003DMT400052239 | Potato | extracellular, golgi | 63.46 | 63.01 |
| CDX83669 | Canola | endoplasmic reticulum, golgi | 61.78 | 60.33 |
| CDY13692 | Canola | endoplasmic reticulum, golgi | 60.58 | 59.43 |
| AT3G27220.1 | Thale cress | endoplasmic reticulum, golgi, mitochondrion, plastid | 60.82 | 59.39 |
| KRH07016 | Soybean | endoplasmic reticulum, golgi | 61.78 | 59.22 |
| Bra025259.1-P | Field mustard | endoplasmic reticulum, golgi, mitochondrion | 59.86 | 58.73 |
| KRG94441 | Soybean | plastid | 61.78 | 57.24 |
| CDY21813 | Canola | mitochondrion | 12.74 | 51.46 |
| CDY13125 | Canola | cytosol | 41.59 | 46.51 |
| GSMUA_Achr6P28410_001 | Banana | nucleus | 78.61 | 41.39 |
| Bra027529.1-P | Field mustard | cytosol | 29.09 | 37.46 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.1 | EntrezGene:8060170 | UniProt:C5YAX9 | EnsemblPlants:EES11025 | ProteinID:EES11025 |
| ProteinID:EES11025.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0019005 | GO:GO:0019538 | GO:GO:0030162 | GO:GO:0031625 | GO:GO:0042787 |
| GO:GO:0043161 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PFAM:PF01344 | PFAM:PF13418 |
| PFAM:PF13964 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF224 | EnsemblPlantsGene:SORBI_3006G127200 | SUPFAM:SSF117281 | TMHMM:TMhelix |
| UniParc:UPI0001A86FCC | RefSeq:XP_002446697.1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr6:+:49227381..49232680
Molecular Weight (calculated)
46163.6 Da
IEP (calculated)
9.485
GRAVY (calculated)
-0.271
Length
416 amino acids
Sequence
(BLAST)
(BLAST)
001: MARPAVKARA PKHLVALAVV AILGLVLVAD YLWASSSASS SAVWSSRLNL HTSPAGPTPP VAKKIKEDKK SVGSTDINAT FADLPAPELK WEEMAEAPVA
101: RLDGAALQIK NLLYVFAGYG TINHVHSHVD IYNFSDNTWG GRFDMPKDMA HSHLGMVTDG RFIYVVTGQY GPQCRGPTAR NFVLDTETKE WNDLPPLPVP
201: RYAPATQLWR GRLHVMGGSK EDRHEPGLEH WSLAVKNGKA LEKEWRSEIP IPRGGPHRAC VVANDKLLVI GGQEGDFMAK PGSPIFKCVR RSEVVYSNVY
301: MLDDGTTWKE LPPMPKPDSH IEFAWVNVNN SLVIAGGTTD KHPITKKMVL VGEVFQFNLD TLEWSVIGRL PFRIKTTLVG YWDGWLYFTS GQRDKGPKDP
401: SPKKVVGCMW RTKLHL
101: RLDGAALQIK NLLYVFAGYG TINHVHSHVD IYNFSDNTWG GRFDMPKDMA HSHLGMVTDG RFIYVVTGQY GPQCRGPTAR NFVLDTETKE WNDLPPLPVP
201: RYAPATQLWR GRLHVMGGSK EDRHEPGLEH WSLAVKNGKA LEKEWRSEIP IPRGGPHRAC VVANDKLLVI GGQEGDFMAK PGSPIFKCVR RSEVVYSNVY
301: MLDDGTTWKE LPPMPKPDSH IEFAWVNVNN SLVIAGGTTD KHPITKKMVL VGEVFQFNLD TLEWSVIGRL PFRIKTTLVG YWDGWLYFTS GQRDKGPKDP
401: SPKKVVGCMW RTKLHL
001: MVRKQKYGKV VLVSCIALLA TGLIADFLWA TSHRFSSAAI SAGLSLPSSL TTVIVPGQEK DTKKKKDSVK ERKLSNTFQD LPAPELKWEK MAASPVPRLD
101: GAAIQIRDLL YVFAGYGTID LVHSHVDIYN FTDNSWGGRF NMPKDMAHSH LGMVTDGRYI YIVTGQFGPQ CRGPTAKTFV LDTDTNTWKD FVPLPVPRYA
201: PATQLWRGRL HVMGGSKENR FTPGLEHWSI AVKDGKSLEN EWRSEIPIPR GGPHRACVVV DDRLFVIGGQ EGDFMAKPGS PIFKCSRRME VVFSDVYMLD
301: EEMKWKVMPP MPKPDSHIEF AWKVVNNSIV IVGGTTEKHP ETKKMVLVGE IFQFNLNTLK WYVIGKLPYR VKTTLAGYWD GQLYFTSGQR DKGPDDPAPR
401: KVMAEMWRTK LILNP
101: GAAIQIRDLL YVFAGYGTID LVHSHVDIYN FTDNSWGGRF NMPKDMAHSH LGMVTDGRYI YIVTGQFGPQ CRGPTAKTFV LDTDTNTWKD FVPLPVPRYA
201: PATQLWRGRL HVMGGSKENR FTPGLEHWSI AVKDGKSLEN EWRSEIPIPR GGPHRACVVV DDRLFVIGGQ EGDFMAKPGS PIFKCSRRME VVFSDVYMLD
301: EEMKWKVMPP MPKPDSHIEF AWKVVNNSIV IVGGTTEKHP ETKKMVLVGE IFQFNLNTLK WYVIGKLPYR VKTTLAGYWD GQLYFTSGQR DKGPDDPAPR
401: KVMAEMWRTK LILNP
Arabidopsis Description
At1g51540 [Source:UniProtKB/TrEMBL;Acc:Q84VX7]
SUBAcon: [golgi,endoplasmic reticulum,vacuole]
SUBAcon: [golgi,endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.