CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027529.1-P	Field mustard	cytosol	80.38	92.57
PGSC0003DMT400068730	Potato	cytosol	10.75	65.57
CDY27540	Canola	extracellular, golgi	62.37	56.59
CDY37314	Canola	extracellular, golgi	62.1	56.34
CDY32405	Canola	golgi	61.83	54.89
CDX82217	Canola	golgi	59.95	53.48
AT1G51540.1	Thale cress	endoplasmic reticulum, golgi, vacuole	53.23	47.71
VIT_09s0054g00620.t01	Wine grape	golgi	50.0	43.66
KRH44609	Soybean	nucleus	47.58	43.17
TraesCS2A01G345800.1	Wheat	golgi	47.31	42.31
TraesCS2B01G364200.1	Wheat	golgi	46.77	41.93
Os04t0487100-01	Rice	mitochondrion	47.31	41.9
HORVU2Hr1G084190.4	Barley	golgi	46.77	41.73
EES11025	Sorghum	golgi	46.51	41.59
TraesCS2D01G344500.1	Wheat	golgi	46.24	41.45
Solyc03g123910.2.1	Tomato	extracellular	45.16	41.08
PGSC0003DMT400023756	Potato	cytosol	26.88	37.17
CDY13692	Canola	endoplasmic reticulum, golgi	41.67	36.56
Zm00001d003246_P001	Maize	golgi	46.24	35.91
CDX83669	Canola	endoplasmic reticulum, golgi	40.86	35.68
CDY06408	Canola	cytosol	6.18	31.94
CDY21813	Canola	mitochondrion	8.6	31.07
GSMUA_Achr6P28410_001	Banana	nucleus	47.31	22.28

Protein Annotations

MapMan:19.3.3.4	Gene3D:2.120.10.80	Gene3D:3.30.1460.50	GO:A0A078FFH2	UniProt:A0A078FFH2	InterPro:Autophagy-rel_prot_3_N
EnsemblPlants:CDY13125	ProteinID:CDY13125	ProteinID:CDY13125.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSBRNA2T00070980001	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller
PFAM:PF03986	PANTHER:PTHR24413	PANTHER:PTHR24413:SF137	SUPFAM:SSF117281	TMHMM:TMhelix	UniParc:UPI0004EEF7D5
SEG:seg	:	:	:	:	:

Description

BnaA09g16920DBnaA09g16920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FFH2]

Coordinates

chrLK032031:+:735900..739495

Molecular Weight (calculated)

41989.3 Da

IEP (calculated)

8.813

GRAVY (calculated)

-0.444

Length

372 amino acids

Sequence
(BLAST)

001: MVLSQKIHGA FKGAVERMTG PRTVSDFKEK GVLSVSEFIL ADDNLVSKYH TWEAGDPSKR KPYLPSQKQF LITKNGRCQI RDRQREMARQ AGKQNCGRLV
101: LVSCLALLAV GLVADFLWAS SHRFSPAGTY LPSSFTTIIG QLPPESNEKD TKQKEEDKAE ERKLSATFQD LDAPQLQWEK MAAAPVPRLD GAAIQIMNLL
201: YVFSGYGNIN LVRSHVDVYN FVDNKWGGRF DMPKEMAHSH LGMLISQRFI YIVTGQYGPQ CRGPTAKTFV LDTDTNTWSD FIPLPVPRYA PATQLWRDGK
301: ALEKEWRSEI PIPRGGPHRA CVVVDDRLFV IGGQEGDFMA KPGSPIFKCS CRLEVKKSER EEHWEWKDHG SL

Best Arabidopsis Sequence Match ( AT5G61500.2 )
(BLAST)

001: MVLSQKLHEA FKGTVERITG PRTISAFKEK GVLSVSEFVL AGDNLVSKCP TWSWESGDAS KRKPYLPSDK QFLITRNVPC LRRAASVAED YEAAGGEVLV
101: DDEDNDGWLA THGKPKDKGK EEDNLPSMDA LDINEKNTIQ SIPTYFGGEE DDDIPDMEEF DEADNVVEND PATLQSTYLV AHEPDDDNIL RTRTYDLSIT
201: YDKYYQTPRV WLTGYDESRM LLQPELVMED VSQDHARKTV KGRQSQLHQL PFLLFHQSFP DLCLLNLTNV EYFCDRLSKM HRSQSKIIHT CLVNMLQFIH
301: VGMELL

Arabidopsis Description

ATG3Autophagy-related protein 3 [Source:UniProtKB/TrEMBL;Acc:A0A178UM04]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.