CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 7
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d049630_P001	Maize	golgi	86.8	85.75
TraesCS7A01G312200.1	Wheat	cytosol	69.44	84.78
TraesCS7D01G308600.1	Wheat	endoplasmic reticulum, golgi, plastid	79.95	78.8
Os08t0128000-01	Rice	golgi	78.73	78.54
HORVU7Hr1G074530.9	Barley	plastid	78.48	78.1
TraesCS7B01G211900.1	Wheat	endoplasmic reticulum, golgi, plastid	74.82	76.88
EES11025	Sorghum	golgi	68.7	67.55
GSMUA_Achr11P...	Banana	golgi	70.17	67.53
GSMUA_Achr10P...	Banana	endoplasmic reticulum, golgi	68.95	65.89
CDY06408	Canola	cytosol	8.07	45.83

Protein Annotations

EnsemblPlants:OQU79823	EnsemblPlantsGene:SORBI_3007G026600	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR24413	PANTHER:PTHR24413:SF137	PFAM:PF01344
PFAM:PF13418	ProteinID:OQU79823	ProteinID:OQU79823.1	SEG:seg	SMART:SM00612	SUPFAM:SSF117281
TMHMM:TMhelix	UniParc:UPI000B8BA9FB	UniProt:A0A1Z5R7T3	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr7:+:2427051..2431277

Molecular Weight (calculated)

45444.5 Da

IEP (calculated)

9.065

GRAVY (calculated)

-0.282

Length

409 amino acids

Sequence
(BLAST)

001: MAGSKPLPLR LAAPLALALL LALALVANFL WAASSRRVSP LSASSSRTVM RKRAKAVGHL NATYADLPAP HWDWEEMPAA PVPRLDGASV QIGNLLYVFA
101: GYGDIDHVHS HVDVYNFTSN TWAERFDMPK EMAHSHLGMA SDGRYIYAVS GQYGPQCRAS INRNFVFDTE TREWHELPPL PLPRYAPATQ LWRGRLHVMG
201: GGKEDRHEPG LEHWSLAVKD GKALENEWQA EVPIPRGGPH RACVVANDKL FVIGGQEGDF MPKPGSPIFK CARRHEVVYG DVYMLDDGSK WKQLSPMPKP
301: DSHIEFAWVV VNNSIVIVGG TTEKHPITKK MILVGEVFCF DLESLTWSVI GRMPFRIKTA LAGYWEGWLY FTSGQRDRGP DNPAPKKVVG SRSTVAAQGH
401: RVDPCRPAR

Best Arabidopsis Sequence Match ( AT1G51540.1 )
(BLAST)

001: MVRKQKYGKV VLVSCIALLA TGLIADFLWA TSHRFSSAAI SAGLSLPSSL TTVIVPGQEK DTKKKKDSVK ERKLSNTFQD LPAPELKWEK MAASPVPRLD
101: GAAIQIRDLL YVFAGYGTID LVHSHVDIYN FTDNSWGGRF NMPKDMAHSH LGMVTDGRYI YIVTGQFGPQ CRGPTAKTFV LDTDTNTWKD FVPLPVPRYA
201: PATQLWRGRL HVMGGSKENR FTPGLEHWSI AVKDGKSLEN EWRSEIPIPR GGPHRACVVV DDRLFVIGGQ EGDFMAKPGS PIFKCSRRME VVFSDVYMLD
301: EEMKWKVMPP MPKPDSHIEF AWKVVNNSIV IVGGTTEKHP ETKKMVLVGE IFQFNLNTLK WYVIGKLPYR VKTTLAGYWD GQLYFTSGQR DKGPDDPAPR
401: KVMAEMWRTK LILNP

Arabidopsis Description

At1g51540 [Source:UniProtKB/TrEMBL;Acc:Q84VX7]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.