Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | golgi | 81.31 | 81.88 |
| TraesCS7A01G312200.1 | Wheat | cytosol | 58.88 | 75.22 |
| Os08t0128000-01 | Rice | golgi | 67.76 | 70.73 |
| OQU79823 | Sorghum | golgi | 65.89 | 68.95 |
| HORVU7Hr1G074530.9 | Barley | plastid | 65.65 | 68.37 |
| Zm00001d049630_P001 | Maize | golgi | 65.89 | 68.12 |
| TraesCS7D01G308600.1 | Wheat | endoplasmic reticulum, golgi, plastid | 64.95 | 66.99 |
| TraesCS7B01G211900.1 | Wheat | endoplasmic reticulum, golgi, plastid | 60.75 | 65.33 |
| CDY06408 | Canola | cytosol | 7.71 | 45.83 |
| GSMUA_Achr6P28410_001 | Banana | nucleus | 71.73 | 38.86 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P03910_001 | EnsemblPlants:GSMUA_Achr10T03910_001 | EnsemblPlantsGene:GSMUA_Achr10G03910_001 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF137 |
| PFAM:PF01344 | PFAM:PF13418 | SEG:seg | SMART:SM00612 | SUPFAM:SSF117281 | TMHMM:TMhelix |
| UniParc:UPI000294C928 | UniProt:M0RF68 | MapMan:35.1 | : | : | : |
Description
Kelch repeat-containing protein At3g27220 [Source:GMGC_GENE;Acc:GSMUA_Achr10G03910_001]
Coordinates
chr10:-:13425724..13431219
Molecular Weight (calculated)
48000.7 Da
IEP (calculated)
8.952
GRAVY (calculated)
-0.247
Length
428 amino acids
Sequence
(BLAST)
(BLAST)
001: MARFGTGKHT PGKYIFLLSC IILLALVLLA DFLWASSSSS SSSRSFPYRV LLSGTLLRQG QSTELDYDLV VLDSSEGNSK GIKLSVKVLN ATFADIPAPQ
101: LEWEEMPEAP VPRLDGAAIQ IKDLFYVFAG YGTIDYVHSH VDIYNFKNNS WGGRFDMPRE MANSHLGMAT DGRYIYAVTG QYGPQCRSPT NRNFVLDTET
201: KKWNELPPLP VPRYAPATQL WRGRLHVMGG SKEDRHEPGL DHWSLAVKDG MALEKEWTTE IPIPRGGPHR SCVVANDQLI VIGGQEGDFM AKPGSPIYKC
301: SRRHEVQYAD VYMLDDGKRW KQLPSMPLPN SHIEFAWVVV NNSIIVVGGT TLKHPITKKM ILLGEVFQFN LDTLKWSVVG RMPFRVKTTL AAFWNGWLYF
401: TSGQRDTGPD DPSPRKVVGS LYRTKLSL
101: LEWEEMPEAP VPRLDGAAIQ IKDLFYVFAG YGTIDYVHSH VDIYNFKNNS WGGRFDMPRE MANSHLGMAT DGRYIYAVTG QYGPQCRSPT NRNFVLDTET
201: KKWNELPPLP VPRYAPATQL WRGRLHVMGG SKEDRHEPGL DHWSLAVKDG MALEKEWTTE IPIPRGGPHR SCVVANDQLI VIGGQEGDFM AKPGSPIYKC
301: SRRHEVQYAD VYMLDDGKRW KQLPSMPLPN SHIEFAWVVV NNSIIVVGGT TLKHPITKKM ILLGEVFQFN LDTLKWSVVG RMPFRVKTTL AAFWNGWLYF
401: TSGQRDTGPD DPSPRKVVGS LYRTKLSL
001: MVRKQKYGKV VLVSCIALLA TGLIADFLWA TSHRFSSAAI SAGLSLPSSL TTVIVPGQEK DTKKKKDSVK ERKLSNTFQD LPAPELKWEK MAASPVPRLD
101: GAAIQIRDLL YVFAGYGTID LVHSHVDIYN FTDNSWGGRF NMPKDMAHSH LGMVTDGRYI YIVTGQFGPQ CRGPTAKTFV LDTDTNTWKD FVPLPVPRYA
201: PATQLWRGRL HVMGGSKENR FTPGLEHWSI AVKDGKSLEN EWRSEIPIPR GGPHRACVVV DDRLFVIGGQ EGDFMAKPGS PIFKCSRRME VVFSDVYMLD
301: EEMKWKVMPP MPKPDSHIEF AWKVVNNSIV IVGGTTEKHP ETKKMVLVGE IFQFNLNTLK WYVIGKLPYR VKTTLAGYWD GQLYFTSGQR DKGPDDPAPR
401: KVMAEMWRTK LILNP
101: GAAIQIRDLL YVFAGYGTID LVHSHVDIYN FTDNSWGGRF NMPKDMAHSH LGMVTDGRYI YIVTGQFGPQ CRGPTAKTFV LDTDTNTWKD FVPLPVPRYA
201: PATQLWRGRL HVMGGSKENR FTPGLEHWSI AVKDGKSLEN EWRSEIPIPR GGPHRACVVV DDRLFVIGGQ EGDFMAKPGS PIFKCSRRME VVFSDVYMLD
301: EEMKWKVMPP MPKPDSHIEF AWKVVNNSIV IVGGTTEKHP ETKKMVLVGE IFQFNLNTLK WYVIGKLPYR VKTTLAGYWD GQLYFTSGQR DKGPDDPAPR
401: KVMAEMWRTK LILNP
Arabidopsis Description
At1g51540 [Source:UniProtKB/TrEMBL;Acc:Q84VX7]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.