Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 6
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU79823 | Sorghum | golgi | 85.75 | 86.8 |
| TraesCS7A01G312200.1 | Wheat | cytosol | 69.57 | 85.97 |
| Os08t0128000-01 | Rice | golgi | 80.43 | 81.22 |
| TraesCS7D01G308600.1 | Wheat | endoplasmic reticulum, golgi, plastid | 79.23 | 79.04 |
| HORVU7Hr1G074530.9 | Barley | plastid | 77.54 | 78.1 |
| TraesCS7B01G211900.1 | Wheat | endoplasmic reticulum, golgi, plastid | 74.4 | 77.39 |
| GSMUA_Achr11P... | Banana | golgi | 69.57 | 67.76 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, golgi | 68.12 | 65.89 |
| Zm00001d003246_P001 | Maize | golgi | 68.6 | 59.29 |
| CDY06408 | Canola | cytosol | 8.45 | 48.61 |
Protein Annotations
| EnsemblPlants:Zm00001d049630_P001 | EnsemblPlants:Zm00001d049630_T001 | EnsemblPlantsGene:Zm00001d049630 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF137 |
| PFAM:PF01344 | PFAM:PF13418 | ProteinID:AQK50949.1 | SEG:seg | SMART:SM00612 | SUPFAM:SSF117281 |
| TMHMM:TMhelix | UniParc:UPI0008446261 | UniProt:A0A1D6PWM4 | MapMan:35.1 | : | : |
Description
Galactose oxidase/kelch repeat superfamily protein
Coordinates
chr4:-:38147590..38150947
Molecular Weight (calculated)
46298.8 Da
IEP (calculated)
9.633
GRAVY (calculated)
-0.241
Length
414 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASKPLRLR LAVPLALALL LALALVTNFL WASSSRRVSP LSAPSSSRTD SLTIAPLDRA PAQVMGKSAK AVWRLNATYA DLPAPHWDWE EMPAAPVPRL
101: DGASVQIGDL LYVFAGYGNI DHVHSHVDVY NFTSNTWTQR FHMPKEMAHS HLGMASDGRY IYAVSGQYGP QCRASINRNF VFDTETREWH GLPPLPLPRY
201: APATQLWRGR LHVMGGGKED RHEPGLEHWS LAVKDGKALE NEWRAEVPIP RGGPHRACIV ANDKLFVIGG QEGDFMAKPG SPIFKCVRRH EVVYGDVYML
301: DDGAKWKELS PMPKPDSHIE FAWVVVNNSI VIVGGTTEKH PITKKMILVG EVFRFDLEAL TWSVIGRMPF RIKTALAGYW EGWLYFTSGQ RDRGPDNPAP
401: KKVVGSMWRT RLHL
101: DGASVQIGDL LYVFAGYGNI DHVHSHVDVY NFTSNTWTQR FHMPKEMAHS HLGMASDGRY IYAVSGQYGP QCRASINRNF VFDTETREWH GLPPLPLPRY
201: APATQLWRGR LHVMGGGKED RHEPGLEHWS LAVKDGKALE NEWRAEVPIP RGGPHRACIV ANDKLFVIGG QEGDFMAKPG SPIFKCVRRH EVVYGDVYML
301: DDGAKWKELS PMPKPDSHIE FAWVVVNNSI VIVGGTTEKH PITKKMILVG EVFRFDLEAL TWSVIGRMPF RIKTALAGYW EGWLYFTSGQ RDRGPDNPAP
401: KKVVGSMWRT RLHL
001: MVRKQKYGKV VLVSCIALLA TGLIADFLWA TSHRFSSAAI SAGLSLPSSL TTVIVPGQEK DTKKKKDSVK ERKLSNTFQD LPAPELKWEK MAASPVPRLD
101: GAAIQIRDLL YVFAGYGTID LVHSHVDIYN FTDNSWGGRF NMPKDMAHSH LGMVTDGRYI YIVTGQFGPQ CRGPTAKTFV LDTDTNTWKD FVPLPVPRYA
201: PATQLWRGRL HVMGGSKENR FTPGLEHWSI AVKDGKSLEN EWRSEIPIPR GGPHRACVVV DDRLFVIGGQ EGDFMAKPGS PIFKCSRRME VVFSDVYMLD
301: EEMKWKVMPP MPKPDSHIEF AWKVVNNSIV IVGGTTEKHP ETKKMVLVGE IFQFNLNTLK WYVIGKLPYR VKTTLAGYWD GQLYFTSGQR DKGPDDPAPR
401: KVMAEMWRTK LILNP
101: GAAIQIRDLL YVFAGYGTID LVHSHVDIYN FTDNSWGGRF NMPKDMAHSH LGMVTDGRYI YIVTGQFGPQ CRGPTAKTFV LDTDTNTWKD FVPLPVPRYA
201: PATQLWRGRL HVMGGSKENR FTPGLEHWSI AVKDGKSLEN EWRSEIPIPR GGPHRACVVV DDRLFVIGGQ EGDFMAKPGS PIFKCSRRME VVFSDVYMLD
301: EEMKWKVMPP MPKPDSHIEF AWKVVNNSIV IVGGTTEKHP ETKKMVLVGE IFQFNLNTLK WYVIGKLPYR VKTTLAGYWD GQLYFTSGQR DKGPDDPAPR
401: KVMAEMWRTK LILNP
Arabidopsis Description
At1g51540 [Source:UniProtKB/TrEMBL;Acc:Q84VX7]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.