Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G308600.1 | Wheat | endoplasmic reticulum, golgi, plastid | 95.22 | 76.87 |
| HORVU7Hr1G074530.9 | Barley | plastid | 94.03 | 76.64 |
| TraesCS7B01G211900.1 | Wheat | endoplasmic reticulum, golgi, plastid | 89.25 | 75.13 |
| Zm00001d049630_P001 | Maize | golgi | 85.97 | 69.57 |
| OQU79823 | Sorghum | golgi | 84.78 | 69.44 |
| Os08t0128000-01 | Rice | golgi | 83.88 | 68.54 |
| TraesCS2A01G345800.1 | Wheat | golgi | 76.12 | 61.3 |
| GSMUA_Achr11P... | Banana | golgi | 76.12 | 60.0 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, golgi | 75.22 | 58.88 |
| CDY06408 | Canola | cytosol | 9.55 | 44.44 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G312200.1 | EnsemblPlantsGene:TraesCS7A01G312200 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF137 | PFAM:PF13418 |
| PFAM:PF13964 | SEG:seg | SMART:SM00612 | SUPFAM:SSF117281 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr7A:-:442977596..442980251
Molecular Weight (calculated)
37808.6 Da
IEP (calculated)
9.230
GRAVY (calculated)
-0.350
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPAPVPRLD GASVQIGDLL YVVAGYGSLD HVHSHVDVYN FTSNTWTGRF DMPKMSNSHL GMASDGRYIY AVSGQFGPQC RPAVSRNFVL DTKLRKWDEL
101: PPLPVPRYAP ATQLWRGRLH VMGGGKEDRH EPGLEHWSLA VKDAKALENE WRAEIPIPRG GPHRACVVAN DKLFVIGGQE GDFMPKPGSP IFKCARRHEV
201: VYGDVYMLDN EAKWKQLSPM PKPDSHIEFA WVVVNNSIVI VGGTTEKHPI TKKMILVGEV FRFDLETLKW SVIGRMPFRI KTALAGYWDG WLYFTSGQRD
301: RGPDNPSPKK VVGSMWRTKL HVWCPMFEPE VSVYS
101: PPLPVPRYAP ATQLWRGRLH VMGGGKEDRH EPGLEHWSLA VKDAKALENE WRAEIPIPRG GPHRACVVAN DKLFVIGGQE GDFMPKPGSP IFKCARRHEV
201: VYGDVYMLDN EAKWKQLSPM PKPDSHIEFA WVVVNNSIVI VGGTTEKHPI TKKMILVGEV FRFDLETLKW SVIGRMPFRI KTALAGYWDG WLYFTSGQRD
301: RGPDNPSPKK VVGSMWRTKL HVWCPMFEPE VSVYS
001: MVRKQKYGKV VLVSCIALLA TGLIADFLWA TSHRFSSAAI SAGLSLPSSL TTVIVPGQEK DTKKKKDSVK ERKLSNTFQD LPAPELKWEK MAASPVPRLD
101: GAAIQIRDLL YVFAGYGTID LVHSHVDIYN FTDNSWGGRF NMPKDMAHSH LGMVTDGRYI YIVTGQFGPQ CRGPTAKTFV LDTDTNTWKD FVPLPVPRYA
201: PATQLWRGRL HVMGGSKENR FTPGLEHWSI AVKDGKSLEN EWRSEIPIPR GGPHRACVVV DDRLFVIGGQ EGDFMAKPGS PIFKCSRRME VVFSDVYMLD
301: EEMKWKVMPP MPKPDSHIEF AWKVVNNSIV IVGGTTEKHP ETKKMVLVGE IFQFNLNTLK WYVIGKLPYR VKTTLAGYWD GQLYFTSGQR DKGPDDPAPR
401: KVMAEMWRTK LILNP
101: GAAIQIRDLL YVFAGYGTID LVHSHVDIYN FTDNSWGGRF NMPKDMAHSH LGMVTDGRYI YIVTGQFGPQ CRGPTAKTFV LDTDTNTWKD FVPLPVPRYA
201: PATQLWRGRL HVMGGSKENR FTPGLEHWSI AVKDGKSLEN EWRSEIPIPR GGPHRACVVV DDRLFVIGGQ EGDFMAKPGS PIFKCSRRME VVFSDVYMLD
301: EEMKWKVMPP MPKPDSHIEF AWKVVNNSIV IVGGTTEKHP ETKKMVLVGE IFQFNLNTLK WYVIGKLPYR VKTTLAGYWD GQLYFTSGQR DKGPDDPAPR
401: KVMAEMWRTK LILNP
Arabidopsis Description
At1g51540 [Source:UniProtKB/TrEMBL;Acc:Q84VX7]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.