Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- endoplasmic reticulum 1
- nucleus 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G312200.1 | Wheat | cytosol | 76.64 | 94.03 |
| TraesCS7D01G308600.1 | Wheat | endoplasmic reticulum, golgi, plastid | 92.7 | 91.81 |
| TraesCS7B01G211900.1 | Wheat | endoplasmic reticulum, golgi, plastid | 87.35 | 90.2 |
| OQU79823 | Sorghum | golgi | 78.1 | 78.48 |
| Os08t0128000-01 | Rice | golgi | 77.62 | 77.8 |
| Zm00001d049630_P001 | Maize | golgi | 78.1 | 77.54 |
| GSMUA_Achr11P... | Banana | golgi | 69.1 | 66.82 |
| HORVU2Hr1G084190.4 | Barley | golgi | 67.64 | 66.67 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, golgi | 68.37 | 65.65 |
| CDY06408 | Canola | cytosol | 8.52 | 48.61 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G074530.9 | EnsemblPlantsGene:HORVU7Hr1G074530 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF137 | PFAM:PF01344 |
| PFAM:PF13418 | SEG:seg | SMART:SM00612 | SUPFAM:SSF117281 | UniParc:UPI000B486247 | UniProt:A0A287WWW3 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:+:426614836..426624687
Molecular Weight (calculated)
45806.2 Da
IEP (calculated)
9.619
GRAVY (calculated)
-0.303
Length
411 amino acids
Sequence
(BLAST)
(BLAST)
001: MAALAPPTTS SKPPLPPRLA LPLALALLLA LAFVADFLSY SSAISPAVSP SSKTVKEGST KLRNGSQPVR HLNATFSDLP APHWEWEEMP PAPVPRLDGA
101: SVQIGDLFYV VAGYESLDHV HSHVDVYNFT SNTWTGRFDM PKKMSNSHLG MASDGRYIYA VSGQFGPQCR PAVSRNFVLD TKLRKWDEMP PLPVPRYAPA
201: TQLWRGRLHV MGGGKEDRHE PGLEHWSLAV KDGKALENEW RAEIPIPRGG PHRACVVAND KLFVIGGQEG DFMPKPGSPI FKCARRHEVV YGDVYMLDNE
301: AKWKQLSPMP KPDSHIEFAW VVVNNSIIIV GGTTEKHPIT KKMILVGEVF QFDLETLKWS VIGRMPFRIK TALAGYWDGW LYFTSGQRDR GPDNPTPKKV
401: VGSMWRTKLH V
101: SVQIGDLFYV VAGYESLDHV HSHVDVYNFT SNTWTGRFDM PKKMSNSHLG MASDGRYIYA VSGQFGPQCR PAVSRNFVLD TKLRKWDEMP PLPVPRYAPA
201: TQLWRGRLHV MGGGKEDRHE PGLEHWSLAV KDGKALENEW RAEIPIPRGG PHRACVVAND KLFVIGGQEG DFMPKPGSPI FKCARRHEVV YGDVYMLDNE
301: AKWKQLSPMP KPDSHIEFAW VVVNNSIIIV GGTTEKHPIT KKMILVGEVF QFDLETLKWS VIGRMPFRIK TALAGYWDGW LYFTSGQRDR GPDNPTPKKV
401: VGSMWRTKLH V
001: MVRKQKYGKV VLVSCIALLA TGLIADFLWA TSHRFSSAAI SAGLSLPSSL TTVIVPGQEK DTKKKKDSVK ERKLSNTFQD LPAPELKWEK MAASPVPRLD
101: GAAIQIRDLL YVFAGYGTID LVHSHVDIYN FTDNSWGGRF NMPKDMAHSH LGMVTDGRYI YIVTGQFGPQ CRGPTAKTFV LDTDTNTWKD FVPLPVPRYA
201: PATQLWRGRL HVMGGSKENR FTPGLEHWSI AVKDGKSLEN EWRSEIPIPR GGPHRACVVV DDRLFVIGGQ EGDFMAKPGS PIFKCSRRME VVFSDVYMLD
301: EEMKWKVMPP MPKPDSHIEF AWKVVNNSIV IVGGTTEKHP ETKKMVLVGE IFQFNLNTLK WYVIGKLPYR VKTTLAGYWD GQLYFTSGQR DKGPDDPAPR
401: KVMAEMWRTK LILNP
101: GAAIQIRDLL YVFAGYGTID LVHSHVDIYN FTDNSWGGRF NMPKDMAHSH LGMVTDGRYI YIVTGQFGPQ CRGPTAKTFV LDTDTNTWKD FVPLPVPRYA
201: PATQLWRGRL HVMGGSKENR FTPGLEHWSI AVKDGKSLEN EWRSEIPIPR GGPHRACVVV DDRLFVIGGQ EGDFMAKPGS PIFKCSRRME VVFSDVYMLD
301: EEMKWKVMPP MPKPDSHIEF AWKVVNNSIV IVGGTTEKHP ETKKMVLVGE IFQFNLNTLK WYVIGKLPYR VKTTLAGYWD GQLYFTSGQR DKGPDDPAPR
401: KVMAEMWRTK LILNP
Arabidopsis Description
At1g51540 [Source:UniProtKB/TrEMBL;Acc:Q84VX7]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.