CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH07016	Soybean	endoplasmic reticulum, golgi	87.53	90.55
VIT_14s0171g00320.t01	Wine grape	extracellular, golgi	64.14	68.09
PGSC0003DMT400052239	Potato	extracellular, golgi	63.25	67.78
Solyc02g093910.2.1	Tomato	extracellular, golgi	62.58	67.39
TraesCS2A01G345800.1	Wheat	golgi	59.02	63.7
KRH44609	Soybean	nucleus	58.13	63.66
TraesCS2D01G344500.1	Wheat	golgi	58.8	63.61
TraesCS2B01G364200.1	Wheat	golgi	58.57	63.37
HORVU2Hr1G084190.4	Barley	golgi	58.35	62.83
Os04t0487100-01	Rice	mitochondrion	58.57	62.62
EES11025	Sorghum	golgi	57.24	61.78
CDY13692	Canola	endoplasmic reticulum, golgi	57.46	60.85
CDX83669	Canola	endoplasmic reticulum, golgi	57.24	60.33
Bra025259.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion	56.35	59.67
AT3G27220.1	Thale cress	endoplasmic reticulum, golgi, mitochondrion, plastid	56.57	59.62
Zm00001d003246_P001	Maize	golgi	55.23	51.77
CDY21813	Canola	mitochondrion	11.8	51.46
GSMUA_Achr6P28410_001	Banana	nucleus	58.35	33.16

Protein Annotations

Gene3D:2.120.10.80	MapMan:35.1	EMBL:ACUP02011960	EnsemblPlantsGene:GLYMA_19G085100	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0019005	GO:GO:0019538	GO:GO:0030162	GO:GO:0031625	GO:GO:0042787	GO:GO:0043161
UniProt:I1N7L8	InterPro:IPR015915	EnsemblPlants:KRG94441	ProteinID:KRG94441	ProteinID:KRG94441.1	InterPro:Kelch-typ_b-propeller
PFAM:PF13964	PANTHER:PTHR24413	PANTHER:PTHR24413:SF111	SUPFAM:SSF117281	TMHMM:TMhelix	UniParc:UPI0002966F34
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:+:30429304..30433027

Molecular Weight (calculated)

50558.8 Da

IEP (calculated)

9.922

GRAVY (calculated)

-0.347

Length

449 amino acids

Sequence
(BLAST)

001: MALIFQANNP KKPMASLTAG FHRHNNHRSH SSSASKIIIF FCLSAFLGLA IIANLFRASL STHYLSIATN WVDTNAPVLI LKLAATPHNS NNKGKDGKIA
101: QRMGPQRFLS ATFADLPAPE WQWEQMPSAP VPRLDGYSIQ IKNTFYVFAG YAHLDHVHSH IDVFDFSINK WVDQIKMPNE MAHSHLGIAS DGRYIYIVSG
201: QYGTQCSGPT TASFSLDTAT KKWKPLPPLP APRYAPATQL WKGRLHVMGG SKENRHTPGR DHWSLAVKDG ETLEQQWRDE VPIPRGGPHR ACIAVNDRLF
301: VIGGQEGDFM AKPGSPIFKC SRRHEVVYGD VYMLDDEMKW KILPPMPKPD SHIECAWVIV NNSIIITGGT TEKHPVTKRM MLVGEVFQFH LDTMKWSVIG
401: KLPYRIKTTL TGFWDGWLYF TSGQRDRGPD NPQPKKVVGE TWRTKLHLS

Best Arabidopsis Sequence Match ( AT1G51540.1 )
(BLAST)

001: MVRKQKYGKV VLVSCIALLA TGLIADFLWA TSHRFSSAAI SAGLSLPSSL TTVIVPGQEK DTKKKKDSVK ERKLSNTFQD LPAPELKWEK MAASPVPRLD
101: GAAIQIRDLL YVFAGYGTID LVHSHVDIYN FTDNSWGGRF NMPKDMAHSH LGMVTDGRYI YIVTGQFGPQ CRGPTAKTFV LDTDTNTWKD FVPLPVPRYA
201: PATQLWRGRL HVMGGSKENR FTPGLEHWSI AVKDGKSLEN EWRSEIPIPR GGPHRACVVV DDRLFVIGGQ EGDFMAKPGS PIFKCSRRME VVFSDVYMLD
301: EEMKWKVMPP MPKPDSHIEF AWKVVNNSIV IVGGTTEKHP ETKKMVLVGE IFQFNLNTLK WYVIGKLPYR VKTTLAGYWD GQLYFTSGQR DKGPDDPAPR
401: KVMAEMWRTK LILNP

Arabidopsis Description

At1g51540 [Source:UniProtKB/TrEMBL;Acc:Q84VX7]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.