Factsheet for VIT_14s0171g00320.t01

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

plastid 1
mitochondrion 2
extracellular 4
nucleus 1
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0054g00620.t01	Wine grape	golgi	76.36	75.82
EES11025	Sorghum	golgi	70.69	71.88
TraesCS2D01G344500.1	Wheat	golgi	70.21	71.57
TraesCS2A01G345800.1	Wheat	golgi	70.21	71.39
HORVU2Hr1G084190.4	Barley	golgi	70.21	71.22
TraesCS2B01G364200.1	Wheat	golgi	69.74	71.08
Solyc02g093910.2.1	Tomato	extracellular, golgi	69.98	70.98
PGSC0003DMT400052239	Potato	extracellular, golgi	69.5	70.17
Os04t0487100-01	Rice	mitochondrion	69.5	70.0
KRH07016	Soybean	endoplasmic reticulum, golgi	67.61	65.9
KRG94441	Soybean	plastid	68.09	64.14
AT3G27220.1	Thale cress	endoplasmic reticulum, golgi, mitochondrion, plastid	63.83	63.38
CDY13692	Canola	endoplasmic reticulum, golgi	63.36	63.21
Bra025259.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion	63.12	62.97
CDX83669	Canola	endoplasmic reticulum, golgi	62.88	62.44
Zm00001d003246_P001	Maize	golgi	67.85	59.92
CDY21813	Canola	mitochondrion	12.53	51.46
GSMUA_Achr6P28410_001	Banana	nucleus	70.69	37.85

Protein Annotations

EntrezGene:100264501	wikigene:100264501	Gene3D:2.120.10.80	MapMan:35.1	EMBL:AM452103	ProteinID:CAN72147
ProteinID:CAN72147.1	ProteinID:CCB62230	ProteinID:CCB62230.1	UniProt:F6I5L2	EMBL:FN596749	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005768	GO:GO:0005794	GO:GO:0005802	GO:GO:0006091	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009061	GO:GO:0009987	GO:GO:0019005	GO:GO:0019538
GO:GO:0030162	GO:GO:0031625	GO:GO:0042787	GO:GO:0043161	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller
InterPro:Kelch_1	EntrezGene:LOC100264501	wikigene:LOC100264501	PFAM:PF01344	PFAM:PF13418	PFAM:PF13964
PANTHER:PTHR24413	PANTHER:PTHR24413:SF111	SMART:SM00612	SUPFAM:SSF117281	TMHMM:TMhelix	UniParc:UPI00015C97A5
ArrayExpress:VIT_14s0171g00320	EnsemblPlantsGene:VIT_14s0171g00320	EnsemblPlants:VIT_14s0171g00320.t01	RefSeq:XP_002270625	RefSeq:XP_002270625.1	SEG:seg

Description

No Description!

Coordinates

chr14:-:26140931..26146302

Molecular Weight (calculated)

47780.7 Da

IEP (calculated)

9.792

GRAVY (calculated)

-0.293

Length

423 amino acids

Sequence
(BLAST)

001: MARSTAKHYT SKKLVLLASF VGFLGAILVA DYLWASASFA YLSIASNWAL TKSSTVVIPT NFDEKLQQRV DVKDKKNRTS GRILSATFAD LPAPELKWEE
101: MQPAPVPRLD GASIQIKNLL YVFAGYGTLN YVHSHVDIYN ITDNAWGGRF DMPKEMAHSH LGMATDGRYI YIVSGQYGPQ CRGPTARCFV LDTETKKWQD
201: LPTLPAPRYA PATQLWRGRL HVMGGGKENR HTPGLEHWSL AVKNGKALEK EWRSEIPIPR GGPHRACVVV DDRLFVIGGQ EGDFMAKPGS PIFKCSRRHE
301: VVYEDVYMLD DEMKWKVLPP MPKPDSHIEF AWVVVNNSII IVGGTTEKHP VTKRMILVGE VFQFHLDSLK WSVIGKMPFR AKTTLAAFWD GWLYFTSGQR
401: DRGPDNPQPR KVIGDMWRTK LSF

Best Arabidopsis Sequence Match ( AT1G51540.1 )
(BLAST)

001: MVRKQKYGKV VLVSCIALLA TGLIADFLWA TSHRFSSAAI SAGLSLPSSL TTVIVPGQEK DTKKKKDSVK ERKLSNTFQD LPAPELKWEK MAASPVPRLD
101: GAAIQIRDLL YVFAGYGTID LVHSHVDIYN FTDNSWGGRF NMPKDMAHSH LGMVTDGRYI YIVTGQFGPQ CRGPTAKTFV LDTDTNTWKD FVPLPVPRYA
201: PATQLWRGRL HVMGGSKENR FTPGLEHWSI AVKDGKSLEN EWRSEIPIPR GGPHRACVVV DDRLFVIGGQ EGDFMAKPGS PIFKCSRRME VVFSDVYMLD
301: EEMKWKVMPP MPKPDSHIEF AWKVVNNSIV IVGGTTEKHP ETKKMVLVGE IFQFNLNTLK WYVIGKLPYR VKTTLAGYWD GQLYFTSGQR DKGPDDPAPR
401: KVMAEMWRTK LILNP

Arabidopsis Description

At1g51540 [Source:UniProtKB/TrEMBL;Acc:Q84VX7]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.