Factsheet for Bra001812.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 6
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82217	Canola	golgi	98.32	98.32
CDY32405	Canola	golgi	94.72	94.27
Bra023903.1-P	Field mustard	extracellular, golgi	90.17	91.71
AT1G51540.1	Thale cress	endoplasmic reticulum, golgi, vacuole	83.45	83.86
PGSC0003DMT400023756	Potato	cytosol	53.96	83.64
PGSC0003DMT400068730	Potato	cytosol	11.03	75.41
VIT_09s0054g00620.t01	Wine grape	golgi	75.54	73.94
KRH44609	Soybean	nucleus	72.66	73.9
Solyc03g123910.2.1	Tomato	extracellular	71.94	73.35
Os04t0487100-01	Rice	mitochondrion	71.46	70.95
EES11025	Sorghum	golgi	70.74	70.91
HORVU2Hr1G084190.4	Barley	golgi	69.3	69.3
TraesCS2A01G345800.1	Wheat	golgi	68.82	68.99
TraesCS2D01G344500.1	Wheat	golgi	68.59	68.92
TraesCS2B01G364200.1	Wheat	golgi	68.11	68.43
Bra025259.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion	62.11	61.08
Zm00001d003246_P001	Maize	golgi	68.59	59.71
Bra027529.1-P	Field mustard	cytosol	38.85	50.15
GSMUA_Achr6P28410_001	Banana	nucleus	70.02	36.96

Protein Annotations

EnsemblPlants:Bra001812.1	EnsemblPlants:Bra001812.1-P	EnsemblPlantsGene:Bra001812	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR24413	PANTHER:PTHR24413:SF137
PFAM:PF01344	PFAM:PF13418	SEG:seg	SUPFAM:SSF117281	TMHMM:TMhelix	UniParc:UPI000254062E
UniProt:M4CC82	MapMan:35.1	:	:	:	:

Description

AT1G51540 (E=6e-202) | INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch repeat type 2 (InterPro:IPR011498), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: kelch repeat-containing protein (TAIR:AT3G27220.1); Has 1571 Blast hits to 1365 proteins in 151 species: Archae - 11; Bacteria - 200; Metazoa - 1128; Fungi - 24; Plants - 53; Viruses - 41; Other Eukaryotes - 114 (source: NCBI BLink).

Coordinates

chrA03:+:18605674..18607395

Molecular Weight (calculated)

46998.0 Da

IEP (calculated)

9.857

GRAVY (calculated)

-0.263

Length

417 amino acids

Sequence
(BLAST)

001: MVKPAGKQSC GRLVFASFLA LLAVGLVADF LWASSHRFSS AIISLPSSVI EKLPPSPNEK DTKKKKNDNA LRERKLSATF QDLPAPLLHW EKMSAAPVPR
101: LDGAAIQIRN FLYVFAGYGN INLVHSHVDV YNFVDNTWGG RFDMPKEMAH SHLGMVTDGR FIYIVTGQYG PQCRGPTAKT FVLDTDTNTW SDFIPLPVPR
201: YAPATQLWRG RLHVMGGSKE NRHTPGLEHW SIAVKDGKAL EKEWRSEIPI PRGGPHRACV VVDDRLFVIG GQEGDFMAKP GSPIFKCSRR LEVVFSDVYM
301: LDEEMKWKVM PSMPKPDSHI EFAWKVVNNS IVIVGGTTEK HPETKKMVLV GEIFQFNLNT MKWYVIGKLP YRVKTTLVGY WEGNLYFTSG QRDKGPDDPA
401: PRKVIAEMWR TKLILTP

Best Arabidopsis Sequence Match ( AT1G51540.1 )
(BLAST)

001: MVRKQKYGKV VLVSCIALLA TGLIADFLWA TSHRFSSAAI SAGLSLPSSL TTVIVPGQEK DTKKKKDSVK ERKLSNTFQD LPAPELKWEK MAASPVPRLD
101: GAAIQIRDLL YVFAGYGTID LVHSHVDIYN FTDNSWGGRF NMPKDMAHSH LGMVTDGRYI YIVTGQFGPQ CRGPTAKTFV LDTDTNTWKD FVPLPVPRYA
201: PATQLWRGRL HVMGGSKENR FTPGLEHWSI AVKDGKSLEN EWRSEIPIPR GGPHRACVVV DDRLFVIGGQ EGDFMAKPGS PIFKCSRRME VVFSDVYMLD
301: EEMKWKVMPP MPKPDSHIEF AWKVVNNSIV IVGGTTEKHP ETKKMVLVGE IFQFNLNTLK WYVIGKLPYR VKTTLAGYWD GQLYFTSGQR DKGPDDPAPR
401: KVMAEMWRTK LILNP

Arabidopsis Description

At1g51540 [Source:UniProtKB/TrEMBL;Acc:Q84VX7]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.