Factsheet for HORVU2Hr1G017760.4

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
TargetP:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G105600.1	Wheat	nucleus	85.42	93.26
TraesCS2D01G105300.1	Wheat	nucleus	81.56	92.76
TraesCS2B01G122500.1	Wheat	nucleus	84.65	92.32
Os07t0679700-01	Rice	nucleus	73.36	80.08
KRH37982	Soybean	cytosol, nucleus, plastid	3.38	79.55
EER99914	Sorghum	nucleus	72.3	78.27
Zm00001d022440_P005	Maize	plastid	71.72	77.15
Zm00001d007173_P003	Maize	mitochondrion, nucleus	67.86	69.47
Zm00001d037893_P001	Maize	mitochondrion	17.95	66.43
Zm00001d029836_P001	Maize	plastid	5.5	64.77
Zm00001d045970_P001	Maize	mitochondrion	16.12	64.73
GSMUA_Achr5P27930_001	Banana	nucleus	35.04	62.59
Zm00001d038148_P001	Maize	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	16.99	60.07
GSMUA_Achr8P01750_001	Banana	nucleus	47.49	57.41
VIT_08s0058g01300.t01	Wine grape	nucleus	45.66	51.19
CDX72340	Canola	nucleus	37.16	50.06
CDY13468	Canola	nucleus	37.16	50.0
Bra023968.1-P	Field mustard	nucleus	37.07	49.87
KRH65426	Soybean	nucleus	42.76	48.95
AT4G32010.1	Thale cress	nucleus	36.29	48.21
KRH76125	Soybean	nucleus	41.99	47.91
Solyc10g075030.1.1	Tomato	nucleus	39.48	46.53
Solyc06g082520.2.1	Tomato	nucleus	37.93	46.51
VIT_06s0004g08100.t01	Wine grape	nucleus	38.9	46.38
CDY02066	Canola	nucleus	34.65	45.79
CDX97828	Canola	nucleus	33.69	45.74
CDX84832	Canola	nucleus	34.36	45.35
Bra021635.1-P	Field mustard	nucleus	33.88	45.35
CDY10738	Canola	nucleus	34.36	45.24
Bra022801.1-P	Field mustard	nucleus	34.07	45.08
Bra018313.1-P	Field mustard	nucleus	34.36	45.06
CDY23997	Canola	nucleus	34.27	44.77
CDY29672	Canola	nucleus	33.88	44.54
AT2G30470.1	Thale cress	nucleus	33.3	43.67
KRH30646	Soybean	nucleus	38.32	43.58
KRH72829	Soybean	nucleus	29.54	42.62
KRG98129	Soybean	nucleus	38.03	42.14
KRH17186	Soybean	nucleus	28.96	41.44
HORVU2Hr1G040390.1	Barley	nucleus	7.43	38.12
HORVU2Hr1G040410.4	Barley	nucleus, plastid	31.08	32.96
HORVU2Hr1G040400.1	Barley	nucleus	12.93	31.75
HORVU7Hr1G078770.5	Barley	nucleus	5.6	16.62
HORVU2Hr1G119600.1	Barley	nucleus	6.27	15.01
HORVU3Hr1G067350.2	Barley	nucleus	5.21	14.56
HORVU3Hr1G092690.2	Barley	nucleus	7.43	11.29

Protein Annotations

MapMan:15.5.5.4	Gene3D:2.40.330.10	Gene3D:3.30.40.100	UniProt:A0A287H7X2	InterPro:B3_DNA-bd	InterPro:DNA-bd_pseudobarrel_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0008270	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU2Hr1G017760	EnsemblPlants:HORVU2Hr1G017760.4
InterPro:IPR003340	InterPro:IPR011124	InterPro:IPR015300	PFAM:PF02362	PFAM:PF07496	PFscan:PS50863
PFscan:PS51050	PANTHER:PTHR23336	PANTHER:PTHR23336:SF29	SMART:SM01019	SUPFAM:SSF101936	UniParc:UPI000B46401C
InterPro:Znf_CW	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:44783368..44876122

Molecular Weight (calculated)

108009.0 Da

IEP (calculated)

7.379

GRAVY (calculated)

-0.529

Length

1036 amino acids

Sequence
(BLAST)

0001: AFTWLARTAC ASRHRSCVGC SLHIQRKTTP PPPRARSPRP SSAPPSVSRG XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0101: XXXXXXXXAG VGEWRKGWPL RSGGFALLCD KCGLAFEQLV FCDIFHQKES GWRDCSFCGK HLHCGCVASK NSFDLLDSGG VQCMNCMKNP GVQSVTVSCQ
0201: VAPKLFLSPQ NNQRLFGKSD ELLPGRPLES PSLMLDSRND DIAILTKSSH PFLVKNLELG QSSNILRQKE TENGARQIKW EQPTLSICDM GRMPFLIRPQ
0301: SALESPQSQC TRRDDNRDPA ADSTTSESVS EACLSMSLGI ANNGNKMEAT STMERPMVSP TTPFSDGREP ATALSPFQHA QRARHFLTRP PRVADGAAFD
0401: PMKDGFPNLR VARPPAEGRG RNQLLPRYWP RITDQELQQI SGDSNSTIVP LFEKVLSASD AGRIGRLVLP KACAEAYFPP ISQPEGRPLT IQDAKGKEWH
0501: FQFRFWPNNN SRMYVLEGVT PCIQSLQLQA GDTVTFSRIE PGGKLVMGFR KATNTVNLPD SQISAIATGS LLGDSFFSNT NENLSIVSGY SGFLQSVKGA
0601: ADLQPSSLFD HHANSADGEV SWLKTDRFGG RPDEGSLQFL HKRSRNISSK SRRLLMDNEE ALELKLSWEE AQELLRPAPS AKPTVVMIED YEFEEYDEPP
0701: VFAKRSIFTS RSTGEQDQWI QCDDCSKWRR LPLNVIIASK WRCADNTWDP KSCSCSAPEE LAHKELQSIL QQYEEIRRRK SNYFLKQSIP EMDASSLDAL
0801: ATAAVFGDVG TQGAASVATT TKHPRHRPGC TCIVCIQPPS GKGPKHNPAC TCNVCMTVRR RFKTLMMRKK QRQSEREEAE ASKRIAWVGR DEPEGSNLSR
0901: SPQTDCDVIM FDKAEANKGH IDLNFHPATR EEEQQQHGGQ PRVSMVSLLE VANRPLESYM KQNGLVSLAT EQGSSSGTAT AAPSQPALVE SEERPSDEGR
1001: AVPVEQEREP MDNMVVDEAA SENQCNAASA SDIAAT

Best Arabidopsis Sequence Match ( AT4G32010.2 )
(BLAST)

001: MESIKVCMNA LCGAASTSGE WKKGWPMRSG DLASLCDKCG CAYEQSIFCE VFHAKESGWR ECNSCDKRLH CGCIASRFMM ELLENGGVTC ISCAKKSGLI
101: SMNVSHESNG KDFPSFASAE HVGSVLERTN LKHLLHFQRI DPTHSSLQMK QEESLLPSSL DALRHKTERK ELSAQPNLSI SLGPTLMTSP FHDAAVDDRS
201: KTNSIFQLAP RSRQLLPKPA NSAPIAAGME PSGSLVSQIH VARPPPEGRG KTQLLPRYWP RITDQELLQL SGHSNSKIIP LFEKVLSASD AGRIGRLVLP
301: KACAEAYFPP ISLPEGLPLK IQDIKGKEWV FQFRFWPNNN SRMYVLEGVT PCIQSMQLQA GDTVTFSRTE PEGKLVMGYR KATNSTATQM FKGSSEPNLN
401: MFSNSLNPGC GDINWSKLEK SEDMAKDNLF LQSSLTSARK RVRNIGTKSK RLLIDSVDVL ELKITWEEAQ ELLRPPQSTK PSIFTLENQD FEEYDEPPVF
501: GKRTLFVSRQ TGEQEQWVQC DACGKWRQLP VDILLPPKWS CSDNLLDPGR SSCSAPDELS PREQDTLVRQ SKEFKRRRLA SSNEKLNQSQ DASALNSLGN
601: AGITTTGEQG EITVAATTKH PRHRAGCSCI VCSQPPSGKG KHKPSCTCTV CEAVKRRFRT LMLRKRNKGE AGQASQQAQS QSECRDETEV ESIPAVELAA
701: GENIDLNSDP GASRVSMMRL LQAAAFPLEA YLKQKAISNT AGEQQSSDMV STEHGSSSAA QETEKDTTNG AHDPVN

Arabidopsis Description

VAL2B3 domain-containing transcription repressor VAL2 [Source:UniProtKB/Swiss-Prot;Acc:Q5CCK4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.