Factsheet for GSMUA_Achr8P01750_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P27930_001	Banana	nucleus	53.56	79.14
KRH37982	Soybean	cytosol, nucleus, plastid	3.97	77.27
GSMUA_Achr5P27940_001	Banana	nucleus	18.9	73.64
TraesCS2D01G105300.1	Wheat	nucleus	57.06	53.68
Os07t0679700-01	Rice	nucleus	59.39	53.64
EER99914	Sorghum	nucleus	58.93	52.77
TraesCS2B01G122500.1	Wheat	nucleus	57.99	52.32
TraesCS2A01G105600.1	Wheat	nucleus	57.88	52.27
Zm00001d022440_P005	Maize	plastid	58.69	52.23
CDY13468	Canola	nucleus	45.16	50.26
CDX72340	Canola	nucleus	45.04	50.2
Bra023968.1-P	Field mustard	nucleus	45.04	50.13
VIT_08s0058g01300.t01	Wine grape	nucleus	53.21	49.35
AT4G32010.1	Thale cress	nucleus	44.11	48.46
KRH65426	Soybean	nucleus	50.99	48.29
HORVU2Hr1G017760.4	Barley	plastid	57.41	47.49
KRH76125	Soybean	nucleus	50.29	47.47
Solyc06g082520.2.1	Tomato	nucleus	46.67	47.34
VIT_06s0004g08100.t01	Wine grape	nucleus	47.96	47.3
Zm00001d007173_P003	Maize	mitochondrion, nucleus	55.78	47.23
Solyc10g075030.1.1	Tomato	nucleus	47.49	46.3
CDX97828	Canola	nucleus	40.14	45.09
CDY02066	Canola	nucleus	41.19	45.03
AT2G30470.1	Thale cress	nucleus	41.31	44.81
Bra021635.1-P	Field mustard	nucleus	40.37	44.7
CDY10738	Canola	nucleus	40.96	44.6
Bra018313.1-P	Field mustard	nucleus	40.96	44.43
CDX84832	Canola	nucleus	40.49	44.2
Bra022801.1-P	Field mustard	nucleus	40.26	44.06
KRH30646	Soybean	nucleus	46.67	43.91
CDY23997	Canola	nucleus	40.37	43.63
CDY29672	Canola	nucleus	40.02	43.53
KRG98129	Soybean	nucleus	46.32	42.46
KRH72829	Soybean	nucleus	35.36	42.2
KRH17186	Soybean	nucleus	35.01	41.44
GSMUA_Achr8P03800_001	Banana	nucleus	37.46	39.29
GSMUA_Achr7P00120_001	Banana	nucleus, plastid	39.44	37.93
GSMUA_Achr4P23790_001	Banana	nucleus	38.27	36.9
Zm00001d037893_P001	Maize	mitochondrion	10.04	30.71
Zm00001d045970_P001	Maize	mitochondrion	8.87	29.46
Zm00001d038148_P001	Maize	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	9.45	27.65
GSMUA_Achr3P00120_001	Banana	nucleus	5.83	27.62
PGSC0003DMT400057590	Potato	nucleus	11.9	22.08
GSMUA_Achr8P18070_001	Banana	nucleus	5.13	21.15
GSMUA_Achr3P32440_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	4.78	20.2
Zm00001d029836_P001	Maize	plastid	1.87	18.18
GSMUA_AchrUn_...	Banana	nucleus	7.58	9.59
GSMUA_Achr7P23040_001	Banana	nucleus	7.58	8.87

Protein Annotations

MapMan:15.5.5.4	Gene3D:2.40.330.10	Gene3D:3.30.40.100	InterPro:B3_DNA-bd	ncoils:Coil	InterPro:DNA-bd_pseudobarrel_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0008270	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr8G01750_001	EnsemblPlants:GSMUA_Achr8P01750_001
EnsemblPlants:GSMUA_Achr8T01750_001	InterPro:IPR003340	InterPro:IPR011124	InterPro:IPR015300	UniProt:M0TLS7	PFAM:PF02362
PFAM:PF07496	PFscan:PS50863	PFscan:PS51050	PANTHER:PTHR23336	PANTHER:PTHR23336:SF28	SMART:SM01019
SUPFAM:SSF101936	UniParc:UPI000295DD0D	InterPro:Znf_CW	SEG:seg	:	:

Description

B3 domain-containing protein Os07g0679700 [Source:GMGC_GENE;Acc:GSMUA_Achr8G01750_001]

Coordinates

chr8:+:1338053..1353142

Molecular Weight (calculated)

94713.8 Da

IEP (calculated)

6.816

GRAVY (calculated)

-0.572

Length

857 amino acids

Sequence
(BLAST)

001: MATVRCMNVA CGLTDPGGEW RRGWELRSGG FATLCVKCGM AYEQSAFCDI FHQKESGWRE CCSCGKRLHC GCIASKSFFH LLDTGGVQCT GCMKNLEVPS
101: VRSYLSEVIQ SFLSQHHQRV NAPSPKSSKE NDADTAVTGR TCEMSATTSD SKIDVSKFVK GKGMQNADLE QSESEIRSYP GPVGSSQISL RDEKDFMTDK
201: SICESLAQSC LSMSLVHSNQ GSNTETCNTA GKPFLALHMA CSIAEGKDER NTISALQQMQ RPQCILAKPL KTCTRSFSEA SKNGLPYMRV ARPPTEGRNQ
301: LLPRYWPRIT DQELQQISGD SNSTIVPLFE KVLSASDAGR IGRLVLPKAC AEAYFPRISQ PEGVPLTIQD TKGKDWHFQF RFWPNNNSRM YVLEGVTPCI
401: QSLQLQAGDT VTFSRIDPEG KLVMGYRKAT NTVPLQQDSQ ISAIANGTFG NETLFTGISE SVPAVSGYSG LLHWHKGGTS NEGMQLQALQ KRTRNIGAKS
501: RRLLMNTDDA LELKLTWEDA QELLRPPPSA KPSIVTIEDY EVEEYDEPPI FGKKTIFTAR PSGEQDQWVQ CDDCYKWRRL PVDVLLLSKW SCADNTWDPK
601: RSSCSAPDEL SQQEMQLLLR QYEDLIRQRT SACFKQDSSE IAASSLDALA AAAALGDVGN QTTTPYATTT KHPRHRPGCT CIVCIQPPSG KGPKHDPTCT
701: CNVCMTVKRR FKTLMMRKRK RQSEREESEV HKKENEFSPV SSRTIMENVE VSQGQIDLNC HPMSHDSQAL NPRNSMMSLL QDAYRPLETY LKQNGLTSLA
801: SQQSKQGSPS SLTVPQAPGE SEGKVPDESH FASASKEQEG GDDEGDVGTD MATSDAS

Best Arabidopsis Sequence Match ( AT4G32010.2 )
(BLAST)

001: MESIKVCMNA LCGAASTSGE WKKGWPMRSG DLASLCDKCG CAYEQSIFCE VFHAKESGWR ECNSCDKRLH CGCIASRFMM ELLENGGVTC ISCAKKSGLI
101: SMNVSHESNG KDFPSFASAE HVGSVLERTN LKHLLHFQRI DPTHSSLQMK QEESLLPSSL DALRHKTERK ELSAQPNLSI SLGPTLMTSP FHDAAVDDRS
201: KTNSIFQLAP RSRQLLPKPA NSAPIAAGME PSGSLVSQIH VARPPPEGRG KTQLLPRYWP RITDQELLQL SGHSNSKIIP LFEKVLSASD AGRIGRLVLP
301: KACAEAYFPP ISLPEGLPLK IQDIKGKEWV FQFRFWPNNN SRMYVLEGVT PCIQSMQLQA GDTVTFSRTE PEGKLVMGYR KATNSTATQM FKGSSEPNLN
401: MFSNSLNPGC GDINWSKLEK SEDMAKDNLF LQSSLTSARK RVRNIGTKSK RLLIDSVDVL ELKITWEEAQ ELLRPPQSTK PSIFTLENQD FEEYDEPPVF
501: GKRTLFVSRQ TGEQEQWVQC DACGKWRQLP VDILLPPKWS CSDNLLDPGR SSCSAPDELS PREQDTLVRQ SKEFKRRRLA SSNEKLNQSQ DASALNSLGN
601: AGITTTGEQG EITVAATTKH PRHRAGCSCI VCSQPPSGKG KHKPSCTCTV CEAVKRRFRT LMLRKRNKGE AGQASQQAQS QSECRDETEV ESIPAVELAA
701: GENIDLNSDP GASRVSMMRL LQAAAFPLEA YLKQKAISNT AGEQQSSDMV STEHGSSSAA QETEKDTTNG AHDPVN

Arabidopsis Description

VAL2B3 domain-containing transcription repressor VAL2 [Source:UniProtKB/Swiss-Prot;Acc:Q5CCK4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.