Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G105600.1 | Wheat | nucleus | 97.91 | 93.99 |
| TraesCS2B01G122500.1 | Wheat | nucleus | 97.37 | 93.37 |
| HORVU2Hr1G017760.4 | Barley | plastid | 92.76 | 81.56 |
| KRH37982 | Soybean | cytosol, nucleus, plastid | 3.84 | 79.55 |
| Os07t0679700-01 | Rice | nucleus | 82.11 | 78.82 |
| EER99914 | Sorghum | nucleus | 81.34 | 77.43 |
| Zm00001d022440_P005 | Maize | plastid | 80.68 | 76.32 |
| Zm00001d007173_P003 | Maize | mitochondrion, nucleus | 76.62 | 68.97 |
| Zm00001d037893_P001 | Maize | mitochondrion | 20.97 | 68.21 |
| Zm00001d045970_P001 | Maize | mitochondrion | 18.99 | 67.05 |
| Zm00001d029836_P001 | Maize | plastid | 6.26 | 64.77 |
| GSMUA_Achr5P27930_001 | Banana | nucleus | 39.74 | 62.41 |
| Zm00001d038148_P001 | Maize | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 19.98 | 62.12 |
| GSMUA_Achr8P01750_001 | Banana | nucleus | 53.68 | 57.06 |
| VIT_08s0058g01300.t01 | Wine grape | nucleus | 50.71 | 50.0 |
| CDY13468 | Canola | nucleus | 42.04 | 49.74 |
| CDX72340 | Canola | nucleus | 41.93 | 49.67 |
| Bra023968.1-P | Field mustard | nucleus | 41.93 | 49.61 |
| AT4G32010.1 | Thale cress | nucleus | 41.16 | 48.08 |
| KRH65426 | Soybean | nucleus | 46.87 | 47.18 |
| VIT_06s0004g08100.t01 | Wine grape | nucleus | 44.79 | 46.95 |
| Solyc06g082520.2.1 | Tomato | nucleus | 43.47 | 46.86 |
| KRH76125 | Soybean | nucleus | 46.21 | 46.37 |
| CDY02066 | Canola | nucleus | 39.08 | 45.41 |
| CDX97828 | Canola | nucleus | 37.87 | 45.22 |
| Solyc10g075030.1.1 | Tomato | nucleus | 43.47 | 45.05 |
| CDY10738 | Canola | nucleus | 38.75 | 44.85 |
| CDX84832 | Canola | nucleus | 38.64 | 44.84 |
| Bra021635.1-P | Field mustard | nucleus | 37.98 | 44.7 |
| Bra022801.1-P | Field mustard | nucleus | 38.42 | 44.7 |
| Bra018313.1-P | Field mustard | nucleus | 38.75 | 44.68 |
| CDY23997 | Canola | nucleus | 38.53 | 44.26 |
| AT2G30470.1 | Thale cress | nucleus | 38.2 | 44.05 |
| CDY29672 | Canola | nucleus | 38.09 | 44.04 |
| KRH30646 | Soybean | nucleus | 43.25 | 43.25 |
| KRH72829 | Soybean | nucleus | 33.37 | 42.34 |
| KRG98129 | Soybean | nucleus | 43.14 | 42.03 |
| KRH17186 | Soybean | nucleus | 32.6 | 41.02 |
| TraesCS2D01G211600.2 | Wheat | plastid | 35.13 | 33.2 |
| PGSC0003DMT400057590 | Potato | nucleus | 11.64 | 22.94 |
| TraesCS3D01G249100.1 | Wheat | plastid | 6.04 | 18.27 |
| TraesCS7D01G326300.2 | Wheat | nucleus | 6.48 | 17.25 |
| TraesCS2D01G560000.1 | Wheat | nucleus | 7.03 | 14.0 |
| TraesCS3D01G412800.1 | Wheat | nucleus | 8.56 | 11.27 |
Protein Annotations
| MapMan:15.5.5.4 | Gene3D:2.40.330.10 | Gene3D:3.30.40.100 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0008270 | InterPro:IPR003340 | InterPro:IPR011124 |
| InterPro:IPR015300 | PFAM:PF02362 | PFAM:PF07496 | PFscan:PS50863 | PFscan:PS51050 | PANTHER:PTHR23336 |
| PANTHER:PTHR23336:SF29 | SMART:SM01019 | SUPFAM:SSF101936 | EnsemblPlantsGene:TraesCS2D01G105300 | EnsemblPlants:TraesCS2D01G105300.1 | InterPro:Znf_CW |
| TIGR:cd10017 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2D:+:56639691..56646412
Molecular Weight (calculated)
100575.0 Da
IEP (calculated)
6.902
GRAVY (calculated)
-0.556
Length
911 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAAARCMN AACGAPAPTA AGVGEWRKGW PLRSGGFAVL CDKCGLAFEQ LVFCDIFHQK ESGWRDCSFC GKRLHCGCVA SKNSFDLLDS GGVQCVNCMK
101: NPGPQPVPCQ VAPKLFLPPQ NNQRLFGKSD EFLPGRPLES PSLMLDSRND DIAIIAKSNH PFMVKNLEIG QSSNILRQKE IENGARQIKW EQPTLSIGDM
201: GRMPFLIRPQ SALESPQSQC TRRDDNRDPT ADSTTSESIS EAGLSMSLGI ANNGNKMEAT STMERPMVSP TTPFSEGREL ATTLSPFQHA QRARHFLTRP
301: PRVAEGAAFD PMRDGFPHLR VARPPAEGRG RNQLLPRYWP RITDQELQQI SGDSNSTIVP LFEKVLSASD AGRIGRLVLP KACAEAYFPP ISQPEGRPLT
401: IQDAKGKEWH FQFRFWPNNN SRMYVLEGVT PCIQSLQLQA GDTVTFSRIE PGGKLVMGFR KATNTVSLPD SQISAIATGS LLGDSFFSNT NENLSIADRF
501: GGRPDEGSFQ FLHKRSRNIG SKSRRLLMDN EEALELKLSW EEAQELLRPA PSAKPTIVMI EDYEFEEYDE PPVFAKRSIF TSRSTGEQDQ WIQCDDCSKW
601: RRVPLNVIIA SKWRCADNTW DPKSCSCSAP EELAHKELQS ILQQYEEIRR RKSNYFLKQS IPEMDASSLD ALATAAVFGE VGNQGAASVA TTTKHPRHRP
701: GCTCIVCIQP PSGKGPKHNP ACTCNVCMTV RRRFKTLMMR KKQRQSEREE AEASKRIAWV GRDEPEGSNL SRSPRTVDTT RDCDVIMFDK ADANKGHIDL
801: NFHPASREEE QQHGGQPRVS MVSLLEVANR PLESYMKQNG LVSLAAEQGS SSGTATVPSQ PAPMESEERP SDEGRAVAVE QEREPVDNMA VDEAAGENQG
901: HAASASDIAA A
101: NPGPQPVPCQ VAPKLFLPPQ NNQRLFGKSD EFLPGRPLES PSLMLDSRND DIAIIAKSNH PFMVKNLEIG QSSNILRQKE IENGARQIKW EQPTLSIGDM
201: GRMPFLIRPQ SALESPQSQC TRRDDNRDPT ADSTTSESIS EAGLSMSLGI ANNGNKMEAT STMERPMVSP TTPFSEGREL ATTLSPFQHA QRARHFLTRP
301: PRVAEGAAFD PMRDGFPHLR VARPPAEGRG RNQLLPRYWP RITDQELQQI SGDSNSTIVP LFEKVLSASD AGRIGRLVLP KACAEAYFPP ISQPEGRPLT
401: IQDAKGKEWH FQFRFWPNNN SRMYVLEGVT PCIQSLQLQA GDTVTFSRIE PGGKLVMGFR KATNTVSLPD SQISAIATGS LLGDSFFSNT NENLSIADRF
501: GGRPDEGSFQ FLHKRSRNIG SKSRRLLMDN EEALELKLSW EEAQELLRPA PSAKPTIVMI EDYEFEEYDE PPVFAKRSIF TSRSTGEQDQ WIQCDDCSKW
601: RRVPLNVIIA SKWRCADNTW DPKSCSCSAP EELAHKELQS ILQQYEEIRR RKSNYFLKQS IPEMDASSLD ALATAAVFGE VGNQGAASVA TTTKHPRHRP
701: GCTCIVCIQP PSGKGPKHNP ACTCNVCMTV RRRFKTLMMR KKQRQSEREE AEASKRIAWV GRDEPEGSNL SRSPRTVDTT RDCDVIMFDK ADANKGHIDL
801: NFHPASREEE QQHGGQPRVS MVSLLEVANR PLESYMKQNG LVSLAAEQGS SSGTATVPSQ PAPMESEERP SDEGRAVAVE QEREPVDNMA VDEAAGENQG
901: HAASASDIAA A
001: MESIKVCMNA LCGAASTSGE WKKGWPMRSG DLASLCDKCG CAYEQSIFCE VFHAKESGWR ECNSCDKRLH CGCIASRFMM ELLENGGVTC ISCAKKSGLI
101: SMNVSHESNG KDFPSFASAE HVGSVLERTN LKHLLHFQRI DPTHSSLQMK QEESLLPSSL DALRHKTERK ELSAQPNLSI SLGPTLMTSP FHDAAVDDRS
201: KTNSIFQLAP RSRQLLPKPA NSAPIAAGME PSGSLVSQIH VARPPPEGRG KTQLLPRYWP RITDQELLQL SGHSNSKIIP LFEKVLSASD AGRIGRLVLP
301: KACAEAYFPP ISLPEGLPLK IQDIKGKEWV FQFRFWPNNN SRMYVLEGVT PCIQSMQLQA GDTVTFSRTE PEGKLVMGYR KATNSTATQM FKGSSEPNLN
401: MFSNSLNPGC GDINWSKLEK SEDMAKDNLF LQSSLTSARK RVRNIGTKSK RLLIDSVDVL ELKITWEEAQ ELLRPPQSTK PSIFTLENQD FEEYDEPPVF
501: GKRTLFVSRQ TGEQEQWVQC DACGKWRQLP VDILLPPKWS CSDNLLDPGR SSCSAPDELS PREQDTLVRQ SKEFKRRRLA SSNEKLNQSQ DASALNSLGN
601: AGITTTGEQG EITVAATTKH PRHRAGCSCI VCSQPPSGKG KHKPSCTCTV CEAVKRRFRT LMLRKRNKGE AGQASQQAQS QSECRDETEV ESIPAVELAA
701: GENIDLNSDP GASRVSMMRL LQAAAFPLEA YLKQKAISNT AGEQQSSDMV STEHGSSSAA QETEKDTTNG AHDPVN
101: SMNVSHESNG KDFPSFASAE HVGSVLERTN LKHLLHFQRI DPTHSSLQMK QEESLLPSSL DALRHKTERK ELSAQPNLSI SLGPTLMTSP FHDAAVDDRS
201: KTNSIFQLAP RSRQLLPKPA NSAPIAAGME PSGSLVSQIH VARPPPEGRG KTQLLPRYWP RITDQELLQL SGHSNSKIIP LFEKVLSASD AGRIGRLVLP
301: KACAEAYFPP ISLPEGLPLK IQDIKGKEWV FQFRFWPNNN SRMYVLEGVT PCIQSMQLQA GDTVTFSRTE PEGKLVMGYR KATNSTATQM FKGSSEPNLN
401: MFSNSLNPGC GDINWSKLEK SEDMAKDNLF LQSSLTSARK RVRNIGTKSK RLLIDSVDVL ELKITWEEAQ ELLRPPQSTK PSIFTLENQD FEEYDEPPVF
501: GKRTLFVSRQ TGEQEQWVQC DACGKWRQLP VDILLPPKWS CSDNLLDPGR SSCSAPDELS PREQDTLVRQ SKEFKRRRLA SSNEKLNQSQ DASALNSLGN
601: AGITTTGEQG EITVAATTKH PRHRAGCSCI VCSQPPSGKG KHKPSCTCTV CEAVKRRFRT LMLRKRNKGE AGQASQQAQS QSECRDETEV ESIPAVELAA
701: GENIDLNSDP GASRVSMMRL LQAAAFPLEA YLKQKAISNT AGEQQSSDMV STEHGSSSAA QETEKDTTNG AHDPVN
Arabidopsis Description
VAL2B3 domain-containing transcription repressor VAL2 [Source:UniProtKB/Swiss-Prot;Acc:Q5CCK4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.