Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d029836_P001 | Maize | plastid | 31.01 | 90.91 |
| Zm00001d012162_P002 | Maize | mitochondrion | 51.94 | 75.71 |
| Zm00001d037893_P001 | Maize | mitochondrion | 81.4 | 75.0 |
| Zm00001d038148_P001 | Maize | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 72.87 | 64.16 |
| Zm00001d022440_P005 | Maize | plastid | 83.33 | 22.33 |
| Zm00001d007173_P003 | Maize | mitochondrion, nucleus | 77.52 | 19.76 |
| TraesCS2D01G105300.1 | Wheat | nucleus | 67.05 | 18.99 |
| TraesCS2A01G105600.1 | Wheat | nucleus | 67.44 | 18.34 |
| TraesCS2B01G122500.1 | Wheat | nucleus | 67.05 | 18.21 |
| Os07t0679700-01 | Rice | nucleus | 63.95 | 17.39 |
| GSMUA_Achr5P27930_001 | Banana | nucleus | 38.37 | 17.07 |
| HORVU2Hr1G017760.4 | Barley | plastid | 64.73 | 16.12 |
| GSMUA_Achr8P01750_001 | Banana | nucleus | 29.46 | 8.87 |
| KRH72829 | Soybean | nucleus | 22.09 | 7.94 |
| KRH17186 | Soybean | nucleus | 20.54 | 7.32 |
| AT4G32010.1 | Thale cress | nucleus | 20.54 | 6.79 |
| CDX72340 | Canola | nucleus | 19.77 | 6.63 |
| CDY13468 | Canola | nucleus | 19.77 | 6.62 |
| VIT_08s0058g01300.t01 | Wine grape | nucleus | 23.26 | 6.49 |
| Bra023968.1-P | Field mustard | nucleus | 19.38 | 6.49 |
| Solyc10g075030.1.1 | Tomato | nucleus | 21.71 | 6.37 |
| CDY10738 | Canola | nucleus | 18.6 | 6.1 |
| VIT_06s0004g08100.t01 | Wine grape | nucleus | 20.54 | 6.1 |
| KRG98129 | Soybean | nucleus | 21.71 | 5.99 |
| Bra018313.1-P | Field mustard | nucleus | 18.22 | 5.95 |
| AT2G30470.1 | Thale cress | nucleus | 17.83 | 5.82 |
| KRH30646 | Soybean | nucleus | 20.54 | 5.82 |
| Solyc06g082520.2.1 | Tomato | nucleus | 18.99 | 5.8 |
| KRH65426 | Soybean | nucleus | 20.16 | 5.75 |
| CDY02066 | Canola | nucleus | 17.44 | 5.74 |
| KRH76125 | Soybean | nucleus | 20.16 | 5.73 |
| CDY29672 | Canola | nucleus | 17.05 | 5.58 |
| CDX84832 | Canola | nucleus | 16.67 | 5.48 |
| Bra021635.1-P | Field mustard | nucleus | 16.28 | 5.43 |
| CDX97828 | Canola | nucleus | 15.89 | 5.37 |
| Bra022801.1-P | Field mustard | nucleus | 16.28 | 5.36 |
| CDY23997 | Canola | nucleus | 16.28 | 5.3 |
| Zm00001d006597_P003 | Maize | plastid | 16.28 | 4.35 |
| Zm00001d021790_P010 | Maize | nucleus | 15.5 | 4.14 |
| Zm00001d052750_P001 | Maize | nucleus | 3.49 | 2.44 |
| Zm00001d042396_P003 | Maize | nucleus | 6.2 | 2.32 |
| Zm00001d034965_P002 | Maize | nucleus | 2.71 | 1.88 |
| Zm00001d001838_P001 | Maize | nucleus | 3.1 | 1.82 |
| Zm00001d011712_P001 | Maize | mitochondrion | 1.94 | 1.28 |
| PGSC0003DMT400057590 | Potato | nucleus | 0.0 | 0.0 |
| KRH37982 | Soybean | cytosol, nucleus, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Zm00001d045970_P001 | EnsemblPlants:Zm00001d045970_T001 | EnsemblPlantsGene:Zm00001d045970 | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF29 | ProteinID:AQL03552.1 |
| SEG:seg | UniParc:UPI0008424DB8 | UniProt:A0A1D6P0A3 | MapMan:35.1 | : | : |
Description
B3 domain-containing transcription repressor VAL2
Coordinates
chr9:-:50873268..50876032
Molecular Weight (calculated)
28687.3 Da
IEP (calculated)
8.354
GRAVY (calculated)
-0.459
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MFKSPRRQEV IANIAQISKV RGSCCQKMGN RCIFHEKGLA YEQFVFCDIF HQKESGWRDC SFCGKRLHYG CVASKNSYDL LDSGGIQCVT CMKNSAAQSA
101: SGQVVPKLFP FPNNLLFFGK SDELLSSRKF GQPPSLMLDS RNDDIAIVNK SNHLFMVSGI EAGQSSNILR QKEIGNGPRQ IKWEQPTLNI GDMGRPLLTR
201: SQSALESPQC TRRDDNKDPT TDSTTSESFP EACLSMNLGI ANNGNRMEAT SIVERPMI
101: SGQVVPKLFP FPNNLLFFGK SDELLSSRKF GQPPSLMLDS RNDDIAIVNK SNHLFMVSGI EAGQSSNILR QKEIGNGPRQ IKWEQPTLNI GDMGRPLLTR
201: SQSALESPQC TRRDDNKDPT TDSTTSESFP EACLSMNLGI ANNGNRMEAT SIVERPMI
001: MESIKVCMNA LCGAASTSGE WKKGWPMRSG DLASLCDKCG CAYEQSIFCE VFHAKESGWR ECNSCDKRLH CGCIASRFMM ELLENGGVTC ISCAKKSGLI
101: SMNVSHESNG KDFPSFASAE HVGSVLERTN LKHLLHFQRI DPTHSSLQMK QEESLLPSSL DALRHKTERK ELSAQPNLSI SLGPTLMTSP FHDAAVDDRS
201: KTNSIFQLAP RSRQLLPKPA NSAPIAAGME PSGSLVSQIH VARPPPEGRG KTQLLPRYWP RITDQELLQL SGHSNSKIIP LFEKVLSASD AGRIGRLVLP
301: KACAEAYFPP ISLPEGLPLK IQDIKGKEWV FQFRFWPNNN SRMYVLEGVT PCIQSMQLQA GDTVTFSRTE PEGKLVMGYR KATNSTATQM FKGSSEPNLN
401: MFSNSLNPGC GDINWSKLEK SEDMAKDNLF LQSSLTSARK RVRNIGTKSK RLLIDSVDVL ELKITWEEAQ ELLRPPQSTK PSIFTLENQD FEEYDEPPVF
501: GKRTLFVSRQ TGEQEQWVQC DACGKWRQLP VDILLPPKWS CSDNLLDPGR SSCSAPDELS PREQDTLVRQ SKEFKRRRLA SSNEKLNQSQ DASALNSLGN
601: AGITTTGEQG EITVAATTKH PRHRAGCSCI VCSQPPSGKG KHKPSCTCTV CEAVKRRFRT LMLRKRNKGE AGQASQQAQS QSECRDETEV ESIPAVELAA
701: GENIDLNSDP GASRVSMMRL LQAAAFPLEA YLKQKAISNT AGEQQSSDMV STEHGSSSAA QETEKDTTNG AHDPVN
101: SMNVSHESNG KDFPSFASAE HVGSVLERTN LKHLLHFQRI DPTHSSLQMK QEESLLPSSL DALRHKTERK ELSAQPNLSI SLGPTLMTSP FHDAAVDDRS
201: KTNSIFQLAP RSRQLLPKPA NSAPIAAGME PSGSLVSQIH VARPPPEGRG KTQLLPRYWP RITDQELLQL SGHSNSKIIP LFEKVLSASD AGRIGRLVLP
301: KACAEAYFPP ISLPEGLPLK IQDIKGKEWV FQFRFWPNNN SRMYVLEGVT PCIQSMQLQA GDTVTFSRTE PEGKLVMGYR KATNSTATQM FKGSSEPNLN
401: MFSNSLNPGC GDINWSKLEK SEDMAKDNLF LQSSLTSARK RVRNIGTKSK RLLIDSVDVL ELKITWEEAQ ELLRPPQSTK PSIFTLENQD FEEYDEPPVF
501: GKRTLFVSRQ TGEQEQWVQC DACGKWRQLP VDILLPPKWS CSDNLLDPGR SSCSAPDELS PREQDTLVRQ SKEFKRRRLA SSNEKLNQSQ DASALNSLGN
601: AGITTTGEQG EITVAATTKH PRHRAGCSCI VCSQPPSGKG KHKPSCTCTV CEAVKRRFRT LMLRKRNKGE AGQASQQAQS QSECRDETEV ESIPAVELAA
701: GENIDLNSDP GASRVSMMRL LQAAAFPLEA YLKQKAISNT AGEQQSSDMV STEHGSSSAA QETEKDTTNG AHDPVN
Arabidopsis Description
VAL2B3 domain-containing transcription repressor VAL2 [Source:UniProtKB/Swiss-Prot;Acc:Q5CCK4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.