Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G105300.1 | Wheat | nucleus | 93.37 | 97.37 |
| TraesCS2A01G105600.1 | Wheat | nucleus | 97.05 | 97.15 |
| HORVU2Hr1G017760.4 | Barley | plastid | 92.32 | 84.65 |
| Os07t0679700-01 | Rice | nucleus | 81.68 | 81.77 |
| EER99914 | Sorghum | nucleus | 81.37 | 80.77 |
| KRH37982 | Soybean | cytosol, nucleus, plastid | 3.68 | 79.55 |
| Zm00001d022440_P005 | Maize | plastid | 80.53 | 79.44 |
| Zm00001d007173_P003 | Maize | mitochondrion, nucleus | 76.42 | 71.74 |
| Zm00001d037893_P001 | Maize | mitochondrion | 20.11 | 68.21 |
| Zm00001d045970_P001 | Maize | mitochondrion | 18.21 | 67.05 |
| Zm00001d029836_P001 | Maize | plastid | 6.0 | 64.77 |
| GSMUA_Achr5P27930_001 | Banana | nucleus | 38.74 | 63.45 |
| Zm00001d038148_P001 | Maize | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 18.84 | 61.09 |
| GSMUA_Achr8P01750_001 | Banana | nucleus | 52.32 | 57.99 |
| VIT_08s0058g01300.t01 | Wine grape | nucleus | 50.11 | 51.52 |
| CDY13468 | Canola | nucleus | 40.74 | 50.26 |
| CDX72340 | Canola | nucleus | 40.63 | 50.2 |
| Bra023968.1-P | Field mustard | nucleus | 40.63 | 50.13 |
| AT4G32010.1 | Thale cress | nucleus | 39.89 | 48.59 |
| KRH65426 | Soybean | nucleus | 46.21 | 48.51 |
| KRH76125 | Soybean | nucleus | 45.58 | 47.69 |
| Solyc06g082520.2.1 | Tomato | nucleus | 42.0 | 47.22 |
| VIT_06s0004g08100.t01 | Wine grape | nucleus | 42.95 | 46.95 |
| Solyc10g075030.1.1 | Tomato | nucleus | 43.05 | 46.53 |
| CDY02066 | Canola | nucleus | 38.32 | 46.43 |
| CDX97828 | Canola | nucleus | 37.26 | 46.4 |
| Bra021635.1-P | Field mustard | nucleus | 37.47 | 45.99 |
| CDY10738 | Canola | nucleus | 38.0 | 45.87 |
| CDX84832 | Canola | nucleus | 37.79 | 45.73 |
| Bra018313.1-P | Field mustard | nucleus | 38.0 | 45.7 |
| Bra022801.1-P | Field mustard | nucleus | 37.58 | 45.59 |
| CDY29672 | Canola | nucleus | 37.47 | 45.18 |
| CDY23997 | Canola | nucleus | 37.68 | 45.15 |
| AT2G30470.1 | Thale cress | nucleus | 36.84 | 44.3 |
| KRH30646 | Soybean | nucleus | 42.11 | 43.91 |
| KRH72829 | Soybean | nucleus | 32.42 | 42.9 |
| KRG98129 | Soybean | nucleus | 42.0 | 42.67 |
| KRH17186 | Soybean | nucleus | 32.11 | 42.13 |
| TraesCS2B01G231800.1 | Wheat | plastid | 34.63 | 34.27 |
| PGSC0003DMT400057590 | Potato | nucleus | 11.26 | 23.16 |
| TraesCS3B01G278000.1 | Wheat | plastid | 6.11 | 19.21 |
| TraesCS7B01G230100.2 | Wheat | nucleus | 6.21 | 17.2 |
| TraesCS2B01G589800.2 | Wheat | nucleus | 6.74 | 14.13 |
| TraesCS3B01G452200.1 | Wheat | nucleus | 8.0 | 11.05 |
Protein Annotations
| MapMan:15.5.5.4 | Gene3D:2.40.330.10 | Gene3D:3.30.40.100 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0008270 | InterPro:IPR003340 | InterPro:IPR011124 |
| InterPro:IPR015300 | PFAM:PF02362 | PFAM:PF07496 | PFscan:PS50863 | PFscan:PS51050 | PANTHER:PTHR23336 |
| PANTHER:PTHR23336:SF29 | SMART:SM01019 | SUPFAM:SSF101936 | EnsemblPlantsGene:TraesCS2B01G122500 | EnsemblPlants:TraesCS2B01G122500.1 | InterPro:Znf_CW |
| TIGR:cd10017 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2B:+:89702400..89709312
Molecular Weight (calculated)
104507.0 Da
IEP (calculated)
6.715
GRAVY (calculated)
-0.560
Length
950 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGMGAAAAA RCMNAACGAP APGAGDWRKG WPLRSGGFAV LCDKCGLAFE QFVFCDIFHQ KESGWRDCSF CGKRLHCGCV ASKNSFDLLD SGGVQCANCM
101: KNPGAHPVSC QVAPKLFLPP QNNQRLFGKS DELLPGRPLE SPSLMIDSRN DDIAIIAKSN HPFMVKNLEI GQSSNNLRQK EIENGARQIK WEQPTLSIGD
201: MGRMPFLIRP QSALESPQSQ CTRRDDNRDP TADSTTSESI SEAGLSMSLG IANNGNKMEA TSTMERPMVS PTTPFSEGRE LATTLSPFQH AQRARHFLTR
301: PSRVAEGAAF DPMRDGFPHL RVARPPAEGR GRNQLLPRYW PRITDQELQQ ISGDSNSTIV PLFEKVLSAS DAGRIGRLVL PKACAEAYFP PISQPEGRPL
401: TIQDAKGKEW HFQFRFWPNN NSRMYVLEGV TPCIQSLQLQ AGDTVTFSRI EPGGKLVMGF RKATNTVSLP DSQISAIATG SLLGDSFFSN TNENLSIVSG
501: YSGFLQSMKG AADLQPSSLF DHHANSADGE VSWLKADRFG GRPDEGSFQF LHKKSRNIGS KSRRLLMDNE EALELKLSWE EAQELLRPAP SAKPTVVMIE
601: DYEFEEYDEP PVFAKRSIFT SRSTGEQDQW IQCDDCSKWR RLPLNVIIAS KWRCADNTWD PKSCSCSAPE ELAHKELQSI LQQYEEIRRR KSNYFLKQSI
701: PEMDASSLDA LATAAVFGEV GNQGAASVAT TTKHPRHRPG CTCIVCIQPP SGKGPKHNPA CTCNVCMTVR RRFKTLMMRK KQRQSEREEA EASKRISWVG
801: RDEPEGSNLS RSPQTVDTMR DGDVIMFDKA DASKGHIDLN FHPASREEEQ QHGGQPRVSM VSLLEVANRP LESYMKQNGL VSLAAEQGSS SGTATVPSQP
901: APMESEERPS DEGRAVPVEQ EREPTDNMAV DEAAGENQGH AASASDIAAA
101: KNPGAHPVSC QVAPKLFLPP QNNQRLFGKS DELLPGRPLE SPSLMIDSRN DDIAIIAKSN HPFMVKNLEI GQSSNNLRQK EIENGARQIK WEQPTLSIGD
201: MGRMPFLIRP QSALESPQSQ CTRRDDNRDP TADSTTSESI SEAGLSMSLG IANNGNKMEA TSTMERPMVS PTTPFSEGRE LATTLSPFQH AQRARHFLTR
301: PSRVAEGAAF DPMRDGFPHL RVARPPAEGR GRNQLLPRYW PRITDQELQQ ISGDSNSTIV PLFEKVLSAS DAGRIGRLVL PKACAEAYFP PISQPEGRPL
401: TIQDAKGKEW HFQFRFWPNN NSRMYVLEGV TPCIQSLQLQ AGDTVTFSRI EPGGKLVMGF RKATNTVSLP DSQISAIATG SLLGDSFFSN TNENLSIVSG
501: YSGFLQSMKG AADLQPSSLF DHHANSADGE VSWLKADRFG GRPDEGSFQF LHKKSRNIGS KSRRLLMDNE EALELKLSWE EAQELLRPAP SAKPTVVMIE
601: DYEFEEYDEP PVFAKRSIFT SRSTGEQDQW IQCDDCSKWR RLPLNVIIAS KWRCADNTWD PKSCSCSAPE ELAHKELQSI LQQYEEIRRR KSNYFLKQSI
701: PEMDASSLDA LATAAVFGEV GNQGAASVAT TTKHPRHRPG CTCIVCIQPP SGKGPKHNPA CTCNVCMTVR RRFKTLMMRK KQRQSEREEA EASKRISWVG
801: RDEPEGSNLS RSPQTVDTMR DGDVIMFDKA DASKGHIDLN FHPASREEEQ QHGGQPRVSM VSLLEVANRP LESYMKQNGL VSLAAEQGSS SGTATVPSQP
901: APMESEERPS DEGRAVPVEQ EREPTDNMAV DEAAGENQGH AASASDIAAA
001: MESIKVCMNA LCGAASTSGE WKKGWPMRSG DLASLCDKCG CAYEQSIFCE VFHAKESGWR ECNSCDKRLH CGCIASRFMM ELLENGGVTC ISCAKKSGLI
101: SMNVSHESNG KDFPSFASAE HVGSVLERTN LKHLLHFQRI DPTHSSLQMK QEESLLPSSL DALRHKTERK ELSAQPNLSI SLGPTLMTSP FHDAAVDDRS
201: KTNSIFQLAP RSRQLLPKPA NSAPIAAGME PSGSLVSQIH VARPPPEGRG KTQLLPRYWP RITDQELLQL SGHSNSKIIP LFEKVLSASD AGRIGRLVLP
301: KACAEAYFPP ISLPEGLPLK IQDIKGKEWV FQFRFWPNNN SRMYVLEGVT PCIQSMQLQA GDTVTFSRTE PEGKLVMGYR KATNSTATQM FKGSSEPNLN
401: MFSNSLNPGC GDINWSKLEK SEDMAKDNLF LQSSLTSARK RVRNIGTKSK RLLIDSVDVL ELKITWEEAQ ELLRPPQSTK PSIFTLENQD FEEYDEPPVF
501: GKRTLFVSRQ TGEQEQWVQC DACGKWRQLP VDILLPPKWS CSDNLLDPGR SSCSAPDELS PREQDTLVRQ SKEFKRRRLA SSNEKLNQSQ DASALNSLGN
601: AGITTTGEQG EITVAATTKH PRHRAGCSCI VCSQPPSGKG KHKPSCTCTV CEAVKRRFRT LMLRKRNKGE AGQASQQAQS QSECRDETEV ESIPAVELAA
701: GENIDLNSDP GASRVSMMRL LQAAAFPLEA YLKQKAISNT AGEQQSSDMV STEHGSSSAA QETEKDTTNG AHDPVN
101: SMNVSHESNG KDFPSFASAE HVGSVLERTN LKHLLHFQRI DPTHSSLQMK QEESLLPSSL DALRHKTERK ELSAQPNLSI SLGPTLMTSP FHDAAVDDRS
201: KTNSIFQLAP RSRQLLPKPA NSAPIAAGME PSGSLVSQIH VARPPPEGRG KTQLLPRYWP RITDQELLQL SGHSNSKIIP LFEKVLSASD AGRIGRLVLP
301: KACAEAYFPP ISLPEGLPLK IQDIKGKEWV FQFRFWPNNN SRMYVLEGVT PCIQSMQLQA GDTVTFSRTE PEGKLVMGYR KATNSTATQM FKGSSEPNLN
401: MFSNSLNPGC GDINWSKLEK SEDMAKDNLF LQSSLTSARK RVRNIGTKSK RLLIDSVDVL ELKITWEEAQ ELLRPPQSTK PSIFTLENQD FEEYDEPPVF
501: GKRTLFVSRQ TGEQEQWVQC DACGKWRQLP VDILLPPKWS CSDNLLDPGR SSCSAPDELS PREQDTLVRQ SKEFKRRRLA SSNEKLNQSQ DASALNSLGN
601: AGITTTGEQG EITVAATTKH PRHRAGCSCI VCSQPPSGKG KHKPSCTCTV CEAVKRRFRT LMLRKRNKGE AGQASQQAQS QSECRDETEV ESIPAVELAA
701: GENIDLNSDP GASRVSMMRL LQAAAFPLEA YLKQKAISNT AGEQQSSDMV STEHGSSSAA QETEKDTTNG AHDPVN
Arabidopsis Description
VAL2B3 domain-containing transcription repressor VAL2 [Source:UniProtKB/Swiss-Prot;Acc:Q5CCK4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.