Factsheet for TraesCS7B01G230100.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G326300.2	Wheat	nucleus	98.83	99.12
TraesCS7A01G329600.1	Wheat	nucleus	98.54	97.97
HORVU7Hr1G078770.5	Barley	nucleus	94.17	92.55
Zm00001d052750_P001	Maize	nucleus	64.72	60.16
Os08t0101000-01	Rice	nucleus	62.39	59.12
EES14344	Sorghum	nucleus	62.68	57.95
Zm00001d034965_P002	Maize	nucleus	60.06	55.38
GSMUA_Achr3P00120_001	Banana	nucleus	20.41	38.67
TraesCS2B01G589800.2	Wheat	nucleus	35.86	27.15
VIT_10s0071g00270.t01	Wine grape	nucleus	23.91	26.89
TraesCS3B01G278000.1	Wheat	plastid	17.49	19.87
TraesCS3B01G452200.1	Wheat	nucleus	22.45	11.19
TraesCS2B01G122500.1	Wheat	nucleus	17.2	6.21
TraesCS2B01G231800.1	Wheat	plastid	15.45	5.52

Protein Annotations

MapMan:15.5.5.5	Gene3D:2.40.330.10	InterPro:B3_DNA-bd	InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0044212	InterPro:IPR003340	InterPro:IPR015300	PFAM:PF02362	PANTHER:PTHR31140
PANTHER:PTHR31140:SF12	SMART:SM01019	SUPFAM:SSF101936	EnsemblPlantsGene:TraesCS7B01G230100	EnsemblPlants:TraesCS7B01G230100.2	TIGR:cd10017
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7B:-:432501532..432504504

Molecular Weight (calculated)

37438.0 Da

IEP (calculated)

6.751

GRAVY (calculated)

-0.569

Length

343 amino acids

Sequence
(BLAST)

001: MGGDGRPSDG GAGGGGGAGH PHQFQYQALL AAVHTQNPNH SHNLPFPLPP LNGPGPDAST HNAARQPPTP RGFADWSAST SAFTSLAVQS TPSAATANAY
101: HYSLSPCYAF WTHYMLNKNA YSYYPAPNQE HTHHFSLDNN QAKDPGSIPS FGIESFNTTS LAPNMSAHMP PMEGPLPTKE PEAPEDMPAR VATIKDEMDA
201: RNGVELKCET VDALPELKQG HESCASKFNS GEYQVILRKE LTKSDVANVG RIVLPKKDAE ASLPPLCERD PVILQMDDMV LPITWKFKYR FWPNNKSRMY
301: ILDSTSEFVK THGLQAGDAL IIYKNPVPGK YIVRGEKAIQ QTN

Best Arabidopsis Sequence Match ( AT3G24650.1 )
(BLAST)

001: MKSLHVAANA GDLAEDCGIL GGDADDTVLM DGIDEVGREI WLDDHGGDNN HVHGHQDDDL IVHHDPSIFY GDLPTLPDFP CMSSSSSSST SPAPVNAIVS
101: SASSSSAASS STSSAASWAI LRSDGEDPTP NQNQYASGNC DDSSGALQST ASMEIPLDSS QGFGCGEGGG DCIDMMETFG YMDLLDSNEF FDTSAIFSQD
201: DDTQNPNLMD QTLERQEDQV VVPMMENNSG GDMQMMNSSL EQDDDLAAVF LEWLKNNKET VSAEDLRKVK IKKATIESAA RRLGGGKEAM KQLLKLILEW
301: VQTNHLQRRR TTTTTTNLSY QQSFQQDPFQ NPNPNNNNLI PPSDQTCFSP STWVPPPPQQ QAFVSDPGFG YMPAPNYPPQ PEFLPLLESP PSWPPPPQSG
401: PMPHQQFPMP PTSQYNQFGD PTGFNGYNMN PYQYPYVPAG QMRDQRLLRL CSSATKEARK KRMARQRRFL SHHHRHNNNN NNNNNNQQNQ TQIGETCAAV
501: APQLNPVATT ATGGTWMYWP NVPAVPPQLP PVMETQLPTM DRAGSASAMP RQQVVPDRRQ GWKPEKNLRF LLQKVLKQSD VGNLGRIVLP KKEAETHLPE
601: LEARDGISLA MEDIGTSRVW NMRYRFWPNN KSRMYLLENT GDFVKTNGLQ EGDFIVIYSD VKCGKYLIRG VKVRQPSGQK PEAPPSSAAT KRQNKSQRNI
701: NNNSPSANVV VASPTSQTVK

Arabidopsis Description

ABI3B3 domain-containing transcription factor ABI3 [Source:UniProtKB/Swiss-Prot;Acc:Q01593]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.