Factsheet for GSMUA_Achr3P00120_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P18070_001	Banana	nucleus	35.91	31.25
GSMUA_Achr3P32440_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	34.25	30.54
VIT_10s0071g00270.t01	Wine grape	nucleus	34.81	20.66
TraesCS7D01G326300.2	Wheat	nucleus	38.67	20.47
TraesCS7B01G230100.2	Wheat	nucleus	38.67	20.41
TraesCS7A01G329600.1	Wheat	nucleus	38.67	20.29
HORVU7Hr1G078770.5	Barley	nucleus	38.67	20.06
Zm00001d034965_P002	Maize	nucleus	36.46	17.74
Os08t0101000-01	Rice	nucleus	35.36	17.68
Zm00001d052750_P001	Maize	nucleus	35.91	17.62
EES14344	Sorghum	nucleus	35.91	17.52
Os04t0676600-01	Rice	nucleus	38.67	16.17
Os04t0676650-00	Rice	nucleus	38.67	15.98
HORVU2Hr1G119600.1	Barley	nucleus	37.02	15.47
TraesCS2B01G589800.2	Wheat	nucleus	37.57	15.01
KXG27429	Sorghum	nucleus	36.46	14.63
Zm00001d001838_P001	Maize	nucleus	35.36	14.58
TraesCS2D01G560000.1	Wheat	nucleus	36.46	14.44
TraesCS2A01G554300.1	Wheat	nucleus	37.02	14.26
GSMUA_AchrUn_...	Banana	nucleus	29.83	7.96
GSMUA_Achr5P27930_001	Banana	nucleus	25.41	7.93
GSMUA_Achr7P23040_001	Banana	nucleus	30.39	7.5
GSMUA_Achr8P03800_001	Banana	nucleus	28.18	6.24
GSMUA_Achr8P01750_001	Banana	nucleus	27.62	5.83
GSMUA_Achr7P00120_001	Banana	nucleus, plastid	28.18	5.72
GSMUA_Achr4P23790_001	Banana	nucleus	27.07	5.51
GSMUA_Achr5P27940_001	Banana	nucleus	0.55	0.45

Protein Annotations

MapMan:15.5.5.5	Gene3D:2.40.330.10	InterPro:B3_DNA-bd	InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr3G00120_001	EnsemblPlants:GSMUA_Achr3P00120_001	EnsemblPlants:GSMUA_Achr3T00120_001	InterPro:IPR003340	InterPro:IPR015300
UniProt:M0SAI0	PFAM:PF02362	PANTHER:PTHR31140	PANTHER:PTHR31140:SF1	SMART:SM01019	SUPFAM:SSF101936
UniParc:UPI000295238A	:	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G00120_001]

Coordinates

chr3:+:152150..153385

Molecular Weight (calculated)

20684.8 Da

IEP (calculated)

8.228

GRAVY (calculated)

-0.484

Length

181 amino acids

Sequence
(BLAST)

001: MILCKELTNS DVSNIGRIVL PKREAEAYLP PLSEREGILL DMDDMTLAVT WKFKFRFWPN NKSRMYILEN TAGFVRAHCL QAGDFLFIYR NPTSGNHIVR
101: GNKGMPQRSP LDSLQYSSRN QFIVNEDCCS STLHVKKARS DRRHSPINPN KIIGHGSSSL TMTELNDLEG DITCHPHYFP E

Best Arabidopsis Sequence Match ( AT3G24650.1 )
(BLAST)

001: MKSLHVAANA GDLAEDCGIL GGDADDTVLM DGIDEVGREI WLDDHGGDNN HVHGHQDDDL IVHHDPSIFY GDLPTLPDFP CMSSSSSSST SPAPVNAIVS
101: SASSSSAASS STSSAASWAI LRSDGEDPTP NQNQYASGNC DDSSGALQST ASMEIPLDSS QGFGCGEGGG DCIDMMETFG YMDLLDSNEF FDTSAIFSQD
201: DDTQNPNLMD QTLERQEDQV VVPMMENNSG GDMQMMNSSL EQDDDLAAVF LEWLKNNKET VSAEDLRKVK IKKATIESAA RRLGGGKEAM KQLLKLILEW
301: VQTNHLQRRR TTTTTTNLSY QQSFQQDPFQ NPNPNNNNLI PPSDQTCFSP STWVPPPPQQ QAFVSDPGFG YMPAPNYPPQ PEFLPLLESP PSWPPPPQSG
401: PMPHQQFPMP PTSQYNQFGD PTGFNGYNMN PYQYPYVPAG QMRDQRLLRL CSSATKEARK KRMARQRRFL SHHHRHNNNN NNNNNNQQNQ TQIGETCAAV
501: APQLNPVATT ATGGTWMYWP NVPAVPPQLP PVMETQLPTM DRAGSASAMP RQQVVPDRRQ GWKPEKNLRF LLQKVLKQSD VGNLGRIVLP KKEAETHLPE
601: LEARDGISLA MEDIGTSRVW NMRYRFWPNN KSRMYLLENT GDFVKTNGLQ EGDFIVIYSD VKCGKYLIRG VKVRQPSGQK PEAPPSSAAT KRQNKSQRNI
701: NNNSPSANVV VASPTSQTVK

Arabidopsis Description

ABI3B3 domain-containing transcription factor ABI3 [Source:UniProtKB/Swiss-Prot;Acc:Q01593]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.