Factsheet for HORVU7Hr1G078770.5

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 2
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytoskeleton, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
WoLF PSORT:	cytoskeleton
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G326300.2	Wheat	nucleus	93.41	95.32
TraesCS7A01G329600.1	Wheat	nucleus	93.12	94.2
TraesCS7B01G230100.2	Wheat	nucleus	92.55	94.17
Zm00001d052750_P001	Maize	nucleus	63.61	60.16
Os08t0101000-01	Rice	nucleus	61.6	59.39
EES14344	Sorghum	nucleus	61.6	57.95
Zm00001d034965_P002	Maize	nucleus	58.45	54.84
GSMUA_Achr3P00120_001	Banana	nucleus	20.06	38.67
VIT_10s0071g00270.t01	Wine grape	nucleus	23.21	26.56
HORVU2Hr1G119600.1	Barley	nucleus	31.81	25.64
HORVU3Hr1G067350.2	Barley	nucleus	18.34	17.25
HORVU3Hr1G092690.2	Barley	nucleus	21.2	10.85
HORVU2Hr1G040400.1	Barley	nucleus	12.89	10.66
HORVU2Hr1G017760.4	Barley	plastid	16.62	5.6
HORVU2Hr1G040410.4	Barley	nucleus, plastid	14.04	5.02
HORVU2Hr1G040390.1	Barley	nucleus	0.0	0.0

Protein Annotations

MapMan:15.5.5.5	Gene3D:2.40.330.10	UniProt:A0A287X0H5	InterPro:B3_DNA-bd	InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0044212	EnsemblPlantsGene:HORVU7Hr1G078770	EnsemblPlants:HORVU7Hr1G078770.5
InterPro:IPR003340	InterPro:IPR015300	PFAM:PF02362	PANTHER:PTHR31140	PANTHER:PTHR31140:SF12	SMART:SM01019
SUPFAM:SSF101936	UniParc:UPI000B487479	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:463238821..463242396

Molecular Weight (calculated)

38334.8 Da

IEP (calculated)

6.869

GRAVY (calculated)

-0.632

Length

349 amino acids

Sequence
(BLAST)

001: MGGDGRPGDG GGGGAGHPHQ FQYQALLAAV HTQNPNHNHN HNHNHNHNLP FPLPPLNGPG PDASTHNAAR QPPTPRGFAD WSASTSAFTS LAVQSTPSTA
101: TANAYHYSLS PCYAFWTHYM LNKNAYSYYP APNQEHTHPF SLDNNQAKDP AGSIPNFGIE SFNTTSLAPN MSAHMPPMEG PLSTKEPEAS EDMPARVVAI
201: KDERDARNGI ELKCETVDAL PELKQGHESC ATKFNSGEYQ VILRKELTKS DVANVGRIVL PKKDAEASLP PLCERDPVIL QMDDMVLPVT WKCYFRFWPN
301: NKSRMYILDS TSEFVKTHGL QAGDALIIYK NPVPGKYIVR GEKAIQQTN

Best Arabidopsis Sequence Match ( AT3G24650.1 )
(BLAST)

001: MKSLHVAANA GDLAEDCGIL GGDADDTVLM DGIDEVGREI WLDDHGGDNN HVHGHQDDDL IVHHDPSIFY GDLPTLPDFP CMSSSSSSST SPAPVNAIVS
101: SASSSSAASS STSSAASWAI LRSDGEDPTP NQNQYASGNC DDSSGALQST ASMEIPLDSS QGFGCGEGGG DCIDMMETFG YMDLLDSNEF FDTSAIFSQD
201: DDTQNPNLMD QTLERQEDQV VVPMMENNSG GDMQMMNSSL EQDDDLAAVF LEWLKNNKET VSAEDLRKVK IKKATIESAA RRLGGGKEAM KQLLKLILEW
301: VQTNHLQRRR TTTTTTNLSY QQSFQQDPFQ NPNPNNNNLI PPSDQTCFSP STWVPPPPQQ QAFVSDPGFG YMPAPNYPPQ PEFLPLLESP PSWPPPPQSG
401: PMPHQQFPMP PTSQYNQFGD PTGFNGYNMN PYQYPYVPAG QMRDQRLLRL CSSATKEARK KRMARQRRFL SHHHRHNNNN NNNNNNQQNQ TQIGETCAAV
501: APQLNPVATT ATGGTWMYWP NVPAVPPQLP PVMETQLPTM DRAGSASAMP RQQVVPDRRQ GWKPEKNLRF LLQKVLKQSD VGNLGRIVLP KKEAETHLPE
601: LEARDGISLA MEDIGTSRVW NMRYRFWPNN KSRMYLLENT GDFVKTNGLQ EGDFIVIYSD VKCGKYLIRG VKVRQPSGQK PEAPPSSAAT KRQNKSQRNI
701: NNNSPSANVV VASPTSQTVK

Arabidopsis Description

ABI3B3 domain-containing transcription factor ABI3 [Source:UniProtKB/Swiss-Prot;Acc:Q01593]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.