Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G249100.1 | Wheat | plastid | 59.57 | 73.42 |
| TraesCS3A01G249100.2 | Wheat | nucleus | 76.28 | 72.94 |
| TraesCS3B01G278000.1 | Wheat | plastid | 59.3 | 72.85 |
| Os01t0713600-01 | Rice | plastid | 45.28 | 58.13 |
| Zm00001d011712_P001 | Maize | mitochondrion | 54.18 | 51.28 |
| KXG33236 | Sorghum | mitochondrion, nucleus | 54.18 | 51.28 |
| GSMUA_Achr3P32440_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 26.95 | 49.26 |
| GSMUA_Achr8P18070_001 | Banana | nucleus | 25.07 | 44.71 |
| AT3G26790.1 | Thale cress | nucleus | 20.49 | 24.28 |
| Solyc02g094460.1.1 | Tomato | nucleus | 17.79 | 24.09 |
| CDY34212 | Canola | nucleus | 19.95 | 24.03 |
| Bra032953.1-P | Field mustard | nucleus | 19.95 | 24.03 |
| CDY28525 | Canola | nucleus | 19.95 | 23.95 |
| CDY13657 | Canola | nucleus | 20.22 | 23.81 |
| VIT_14s0068g01290.t01 | Wine grape | nucleus | 18.33 | 23.69 |
| CDY53003 | Canola | nucleus | 19.95 | 23.57 |
| PGSC0003DMT400052167 | Potato | nucleus | 18.06 | 23.34 |
| KRG94672 | Soybean | nucleus | 20.49 | 22.89 |
| KRH06856 | Soybean | nucleus | 20.49 | 22.49 |
| CDY15679 | Canola | nucleus | 19.68 | 20.92 |
| CDX94608 | Canola | nucleus | 19.41 | 20.63 |
| CDY46611 | Canola | nucleus | 19.95 | 20.61 |
| CDY66878 | Canola | nucleus | 19.95 | 20.56 |
| Bra030087.1-P | Field mustard | nucleus | 18.87 | 20.35 |
| Bra032890.1-P | Field mustard | nucleus | 19.14 | 20.06 |
| Bra025229.1-P | Field mustard | nucleus | 14.29 | 19.49 |
| AT1G28300.1 | Thale cress | nucleus | 18.33 | 18.73 |
| HORVU7Hr1G078770.5 | Barley | nucleus | 17.25 | 18.34 |
| KRG89628 | Soybean | plastid | 17.52 | 17.24 |
| KRG89627 | Soybean | nucleus | 16.98 | 16.71 |
| HORVU2Hr1G119600.1 | Barley | nucleus | 17.79 | 15.24 |
| HORVU3Hr1G092690.2 | Barley | nucleus | 19.41 | 10.56 |
| HORVU2Hr1G040400.1 | Barley | nucleus | 11.59 | 10.19 |
| HORVU2Hr1G040410.4 | Barley | nucleus, plastid | 14.02 | 5.32 |
| HORVU2Hr1G017760.4 | Barley | plastid | 14.56 | 5.21 |
| HORVU2Hr1G040390.1 | Barley | nucleus | 1.35 | 2.48 |
Protein Annotations
| MapMan:15.5.5.5 | Gene3D:2.40.330.10 | UniProt:A0A287LGA0 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:HORVU3Hr1G067350 | EnsemblPlants:HORVU3Hr1G067350.2 | InterPro:IPR003340 | InterPro:IPR015300 |
| PFAM:PF02362 | PFscan:PS50863 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF20 | SMART:SM01019 | SUPFAM:SSF101936 |
| UniParc:UPI000B46FBC8 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:511545517..511549047
Molecular Weight (calculated)
41231.1 Da
IEP (calculated)
11.089
GRAVY (calculated)
-0.692
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: GSDECANHHG RGRGRMQAEC ETRNGTQTRR PPDFKTHKPA ICLRAPRGIP RRKKRQQRPP RASHPAPATS RPPGWPSASP RRALAPISEL ARHLAPRPPS
101: PILRPPPPIN APRATPTLAA ASSPSSSRPT GMAAISSSKR RSPSASTAAS SSSADGIGEP GPQLVTRKRR SVRRGPRGGV RWMPAIRPHQ VPGLRVILQK
201: ELRNSDISQL GRIVLPKKES EAYLPTLASK DGRSLRMHDL LNAQEWTFKY RYWPNNNSRM YVLENTGDYV RTHNLRVGDF IMIYKDDDNN RFVIRAKKAG
301: DDLVAAMPQF HEHISGILPI PEVDDYVSLI PSPADISAFI PQADENYEIF DGIFNSLPEI PVANVRYSDF F
101: PILRPPPPIN APRATPTLAA ASSPSSSRPT GMAAISSSKR RSPSASTAAS SSSADGIGEP GPQLVTRKRR SVRRGPRGGV RWMPAIRPHQ VPGLRVILQK
201: ELRNSDISQL GRIVLPKKES EAYLPTLASK DGRSLRMHDL LNAQEWTFKY RYWPNNNSRM YVLENTGDYV RTHNLRVGDF IMIYKDDDNN RFVIRAKKAG
301: DDLVAAMPQF HEHISGILPI PEVDDYVSLI PSPADISAFI PQADENYEIF DGIFNSLPEI PVANVRYSDF F
001: MMVDENVETK ASTLVASVDH GFGSGSGHDH HGLSASVPLL GVNWKKRRMP RQRRSSSSFN LLSFPPPMPP ISHVPTPLPA RKIDPRKLRF LFQKELKNSD
101: VSSLRRMILP KKAAEAHLPA LECKEGIPIR MEDLDGFHVW TFKYRYWPNN NSRMYVLENT GDFVNAHGLQ LGDFIMVYQD LYSNNYVIQA RKASEEEEVD
201: VINLEEDDVY TNLTRIENTV VNDLLLQDFN HHNNNNNNNS NSNSNKCSYY YPVIDDVTTN TESFVYDTTA LTSNDTPLDF LGGHTTTTNN YYSKFGTFDG
301: LGSVENISLD DFY
101: VSSLRRMILP KKAAEAHLPA LECKEGIPIR MEDLDGFHVW TFKYRYWPNN NSRMYVLENT GDFVNAHGLQ LGDFIMVYQD LYSNNYVIQA RKASEEEEVD
201: VINLEEDDVY TNLTRIENTV VNDLLLQDFN HHNNNNNNNS NSNSNKCSYY YPVIDDVTTN TESFVYDTTA LTSNDTPLDF LGGHTTTTNN YYSKFGTFDG
301: LGSVENISLD DFY
Arabidopsis Description
FUS3B3 domain-containing transcription factor FUS3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LW31]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.