Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025229.1-P | Field mustard | nucleus | 86.03 | 99.63 |
| CDY53003 | Canola | nucleus | 98.41 | 98.73 |
| CDY28525 | Canola | nucleus | 77.78 | 79.29 |
| CDY34212 | Canola | nucleus | 77.46 | 79.22 |
| AT3G26790.1 | Thale cress | nucleus | 75.87 | 76.36 |
| VIT_14s0068g01290.t01 | Wine grape | nucleus | 46.98 | 51.57 |
| KRG94672 | Soybean | nucleus | 51.11 | 48.49 |
| KRH06856 | Soybean | nucleus | 51.75 | 48.22 |
| Solyc02g094460.1.1 | Tomato | nucleus | 37.14 | 42.7 |
| PGSC0003DMT400052167 | Potato | nucleus | 37.14 | 40.77 |
| GSMUA_Achr8P18070_001 | Banana | nucleus | 23.49 | 35.58 |
| GSMUA_Achr3P32440_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 22.86 | 35.47 |
| Os01t0713600-01 | Rice | plastid | 24.76 | 26.99 |
| TraesCS3D01G249100.1 | Wheat | plastid | 25.4 | 26.58 |
| TraesCS3B01G278000.1 | Wheat | plastid | 25.4 | 26.49 |
| CDY66878 | Canola | nucleus | 24.13 | 21.11 |
| KXG33236 | Sorghum | mitochondrion, nucleus | 26.03 | 20.92 |
| Zm00001d011712_P001 | Maize | mitochondrion | 26.03 | 20.92 |
| TraesCS3A01G249100.2 | Wheat | nucleus | 25.4 | 20.62 |
| CDY46611 | Canola | nucleus | 23.49 | 20.61 |
| HORVU3Hr1G067350.2 | Barley | nucleus | 23.81 | 20.22 |
| CDY15679 | Canola | nucleus | 21.9 | 19.77 |
| CDX94608 | Canola | nucleus | 21.59 | 19.48 |
| CDY15121 | Canola | nucleus | 26.03 | 12.2 |
| CDX93029 | Canola | nucleus | 26.03 | 11.42 |
| CDY02066 | Canola | nucleus | 21.59 | 8.67 |
| CDY29672 | Canola | nucleus | 21.59 | 8.63 |
| CDX84832 | Canola | nucleus | 21.27 | 8.54 |
| CDY10738 | Canola | nucleus | 21.27 | 8.51 |
| CDX97828 | Canola | nucleus | 20.32 | 8.39 |
| CDY23997 | Canola | nucleus | 20.95 | 8.32 |
| CDX72340 | Canola | nucleus | 20.32 | 8.32 |
| CDY13468 | Canola | nucleus | 20.32 | 8.31 |
| CDX79071 | Canola | nucleus | 18.41 | 8.03 |
| CDX82834 | Canola | nucleus | 18.41 | 8.02 |
| CDX68809 | Canola | cytosol | 0.95 | 2.29 |
Protein Annotations
| MapMan:15.5.5.5 | Gene3D:2.40.330.10 | GO:A0A078FKZ1 | UniProt:A0A078FKZ1 | InterPro:B3_DNA-bd | EnsemblPlants:CDY13657 |
| ProteinID:CDY13657 | ProteinID:CDY13657.1 | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSBRNA2T00078078001 | InterPro:IPR003340 | InterPro:IPR015300 | PFAM:PF02362 | PFscan:PS50863 | PANTHER:PTHR31140 |
| PANTHER:PTHR31140:SF23 | SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI0004EED469 | SEG:seg | : |
Description
BnaA06g32660DBnaA06g32660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FKZ1]
Coordinates
chrLK032037:-:489307..491641
Molecular Weight (calculated)
35706.5 Da
IEP (calculated)
4.595
GRAVY (calculated)
-0.540
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEAGYAHDV ETKVSALMAS VDHLPMFGSG SGHDNGYLSA SVPLLGVNWK KRRMPRQRRS SSSFNLLYFP TLPPSSHVPT HLPARKIDTG KLRFLFQKEL
101: KNSDVSSLRR MILPKKAAEA HLPALEYKEG IPLEMEDLDG LHVWTFKYRF WPNNNSRMYV LENTGDFVST HCVQPGDFIM FYQYLDSCNY VIQAKKAYEE
201: EEEEDITNVE EDDVYTNLTR IENTVLNDLP LPDYNQHYNN NNNEKCSYVY PAFDDVTATT TNAPFVYDTT ALSSNDTPLD YLGGPATTTS TNSYYSELGP
301: FEGFGSVENI SLDDF
101: KNSDVSSLRR MILPKKAAEA HLPALEYKEG IPLEMEDLDG LHVWTFKYRF WPNNNSRMYV LENTGDFVST HCVQPGDFIM FYQYLDSCNY VIQAKKAYEE
201: EEEEDITNVE EDDVYTNLTR IENTVLNDLP LPDYNQHYNN NNNEKCSYVY PAFDDVTATT TNAPFVYDTT ALSSNDTPLD YLGGPATTTS TNSYYSELGP
301: FEGFGSVENI SLDDF
001: MMVDENVETK ASTLVASVDH GFGSGSGHDH HGLSASVPLL GVNWKKRRMP RQRRSSSSFN LLSFPPPMPP ISHVPTPLPA RKIDPRKLRF LFQKELKNSD
101: VSSLRRMILP KKAAEAHLPA LECKEGIPIR MEDLDGFHVW TFKYRYWPNN NSRMYVLENT GDFVNAHGLQ LGDFIMVYQD LYSNNYVIQA RKASEEEEVD
201: VINLEEDDVY TNLTRIENTV VNDLLLQDFN HHNNNNNNNS NSNSNKCSYY YPVIDDVTTN TESFVYDTTA LTSNDTPLDF LGGHTTTTNN YYSKFGTFDG
301: LGSVENISLD DFY
101: VSSLRRMILP KKAAEAHLPA LECKEGIPIR MEDLDGFHVW TFKYRYWPNN NSRMYVLENT GDFVNAHGLQ LGDFIMVYQD LYSNNYVIQA RKASEEEEVD
201: VINLEEDDVY TNLTRIENTV VNDLLLQDFN HHNNNNNNNS NSNSNKCSYY YPVIDDVTTN TESFVYDTTA LTSNDTPLDF LGGHTTTTNN YYSKFGTFDG
301: LGSVENISLD DFY
Arabidopsis Description
FUS3B3 domain-containing transcription factor FUS3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LW31]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.