Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13657 | Canola | nucleus | 98.73 | 98.41 |
| Bra025229.1-P | Field mustard | nucleus | 84.71 | 97.79 |
| CDY28525 | Canola | nucleus | 78.03 | 79.29 |
| CDY34212 | Canola | nucleus | 77.71 | 79.22 |
| AT3G26790.1 | Thale cress | nucleus | 76.43 | 76.68 |
| VIT_14s0068g01290.t01 | Wine grape | nucleus | 46.82 | 51.22 |
| KRG94672 | Soybean | nucleus | 51.27 | 48.49 |
| KRH06856 | Soybean | nucleus | 51.91 | 48.22 |
| Solyc02g094460.1.1 | Tomato | nucleus | 36.94 | 42.34 |
| PGSC0003DMT400052167 | Potato | nucleus | 36.94 | 40.42 |
| GSMUA_Achr8P18070_001 | Banana | nucleus | 23.25 | 35.1 |
| GSMUA_Achr3P32440_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 22.61 | 34.98 |
| Os01t0713600-01 | Rice | plastid | 24.52 | 26.64 |
| TraesCS3D01G249100.1 | Wheat | plastid | 25.16 | 26.25 |
| TraesCS3B01G278000.1 | Wheat | plastid | 25.16 | 26.16 |
| CDY66878 | Canola | nucleus | 23.89 | 20.83 |
| KXG33236 | Sorghum | mitochondrion, nucleus | 25.8 | 20.66 |
| Zm00001d011712_P001 | Maize | mitochondrion | 25.8 | 20.66 |
| TraesCS3A01G249100.2 | Wheat | nucleus | 25.16 | 20.36 |
| CDY46611 | Canola | nucleus | 23.25 | 20.33 |
| HORVU3Hr1G067350.2 | Barley | nucleus | 23.57 | 19.95 |
| CDY15679 | Canola | nucleus | 21.66 | 19.48 |
| CDX94608 | Canola | nucleus | 21.34 | 19.2 |
| CDY15121 | Canola | nucleus | 25.8 | 12.05 |
| CDX93029 | Canola | nucleus | 25.8 | 11.28 |
| CDY02066 | Canola | nucleus | 21.34 | 8.55 |
| CDY29672 | Canola | nucleus | 21.34 | 8.5 |
| CDX84832 | Canola | nucleus | 21.02 | 8.41 |
| CDY10738 | Canola | nucleus | 21.02 | 8.39 |
| CDX72340 | Canola | nucleus | 20.38 | 8.32 |
| CDY13468 | Canola | nucleus | 20.38 | 8.31 |
| CDX97828 | Canola | nucleus | 20.06 | 8.26 |
| CDY23997 | Canola | nucleus | 20.7 | 8.2 |
| CDX79071 | Canola | nucleus | 18.15 | 7.89 |
| CDX82834 | Canola | nucleus | 18.15 | 7.88 |
| CDX68809 | Canola | cytosol | 0.96 | 2.29 |
Protein Annotations
| MapMan:15.5.5.5 | Gene3D:2.40.330.10 | GO:A0A078IVK2 | UniProt:A0A078IVK2 | InterPro:B3_DNA-bd | EnsemblPlants:CDY53003 |
| ProteinID:CDY53003 | ProteinID:CDY53003.1 | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSBRNA2T00008303001 | InterPro:IPR003340 | InterPro:IPR015300 | PFAM:PF02362 | PFscan:PS50863 | PANTHER:PTHR31140 |
| PANTHER:PTHR31140:SF23 | SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI0004EECC15 | SEG:seg | : |
Description
BnaC07g48930DBnaC07g48930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IVK2]
Coordinates
chrLK033151:+:65086..67083
Molecular Weight (calculated)
35454.2 Da
IEP (calculated)
4.628
GRAVY (calculated)
-0.520
Length
314 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEAGYAHDV ETKVSALMAS VDHLPIFGSG SGHDNGYLSA SVPLLGVNWK KRRMPRQRRS SSSFNLLSFP TLPPSSHVPT HLPARKIDTG KLRFLFQKEL
101: KNSDVSSLRR MILPKKAAEA HLPALEYKEG IPLEMEDLDG LHVWTFKYRF WPNNNSRMYV LENTGDFVST HCVQPGDFIM FYQYLDSCNY VIQAKNAYEE
201: EEDITNVEED DVYTNLTRIE NTVLNDLPLP DYNQHYNNNN NNEKCSYVYP AFDDVTATTT NAPFVYDTTA LSSNDTPLDY LGGPATTTST NSYYSELGPF
301: EGFGSVENIS LDDF
101: KNSDVSSLRR MILPKKAAEA HLPALEYKEG IPLEMEDLDG LHVWTFKYRF WPNNNSRMYV LENTGDFVST HCVQPGDFIM FYQYLDSCNY VIQAKNAYEE
201: EEDITNVEED DVYTNLTRIE NTVLNDLPLP DYNQHYNNNN NNEKCSYVYP AFDDVTATTT NAPFVYDTTA LSSNDTPLDY LGGPATTTST NSYYSELGPF
301: EGFGSVENIS LDDF
001: MMVDENVETK ASTLVASVDH GFGSGSGHDH HGLSASVPLL GVNWKKRRMP RQRRSSSSFN LLSFPPPMPP ISHVPTPLPA RKIDPRKLRF LFQKELKNSD
101: VSSLRRMILP KKAAEAHLPA LECKEGIPIR MEDLDGFHVW TFKYRYWPNN NSRMYVLENT GDFVNAHGLQ LGDFIMVYQD LYSNNYVIQA RKASEEEEVD
201: VINLEEDDVY TNLTRIENTV VNDLLLQDFN HHNNNNNNNS NSNSNKCSYY YPVIDDVTTN TESFVYDTTA LTSNDTPLDF LGGHTTTTNN YYSKFGTFDG
301: LGSVENISLD DFY
101: VSSLRRMILP KKAAEAHLPA LECKEGIPIR MEDLDGFHVW TFKYRYWPNN NSRMYVLENT GDFVNAHGLQ LGDFIMVYQD LYSNNYVIQA RKASEEEEVD
201: VINLEEDDVY TNLTRIENTV VNDLLLQDFN HHNNNNNNNS NSNSNKCSYY YPVIDDVTTN TESFVYDTTA LTSNDTPLDF LGGHTTTTNN YYSKFGTFDG
301: LGSVENISLD DFY
Arabidopsis Description
FUS3B3 domain-containing transcription factor FUS3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LW31]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.