Factsheet for Bra025229.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13657	Canola	nucleus	99.63	86.03
CDY53003	Canola	nucleus	97.79	84.71
Bra032953.1-P	Field mustard	nucleus	74.26	65.58
AT3G26790.1	Thale cress	nucleus	72.79	63.26
VIT_14s0068g01290.t01	Wine grape	nucleus	42.65	40.42
KRG94672	Soybean	nucleus	45.22	37.05
KRH06856	Soybean	nucleus	45.96	36.98
Solyc02g094460.1.1	Tomato	nucleus	33.09	32.85
PGSC0003DMT400052167	Potato	nucleus	33.09	31.36
GSMUA_Achr3P32440_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	17.28	23.15
GSMUA_Achr8P18070_001	Banana	nucleus	17.28	22.6
TraesCS3D01G249100.1	Wheat	plastid	21.32	19.27
TraesCS3B01G278000.1	Wheat	plastid	21.32	19.21
Os01t0713600-01	Rice	plastid	20.22	19.03
TraesCS3A01G249100.2	Wheat	nucleus	21.32	14.95
KXG33236	Sorghum	mitochondrion, nucleus	21.32	14.8
Zm00001d011712_P001	Maize	mitochondrion	21.32	14.8
HORVU3Hr1G067350.2	Barley	nucleus	19.49	14.29
Bra032890.1-P	Field mustard	nucleus	17.65	13.56
Bra030087.1-P	Field mustard	nucleus	15.81	12.5
Bra013248.1-P	Field mustard	nucleus	20.96	7.95
Bra022801.1-P	Field mustard	nucleus	19.49	6.77
Bra018313.1-P	Field mustard	nucleus	19.49	6.71
Bra021635.1-P	Field mustard	nucleus	18.75	6.59
Bra023968.1-P	Field mustard	nucleus	17.65	6.23
Bra013535.1-P	Field mustard	nucleus	15.07	5.87

Protein Annotations

MapMan:15.5.5.5	Gene3D:2.40.330.10	InterPro:B3_DNA-bd	EnsemblPlantsGene:Bra025229	EnsemblPlants:Bra025229.1	EnsemblPlants:Bra025229.1-P
InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003340	InterPro:IPR015300
UniProt:M4E8X3	PFAM:PF02362	PANTHER:PTHR31140	PANTHER:PTHR31140:SF23	SMART:SM01019	SUPFAM:SSF101936
UniParc:UPI000253F62A	SEG:seg	:	:	:	:

Description

AT3G26790 (E=1e-064) FUS3 | FUS3 (FUSCA 3); DNA binding / transcription activator/ transcription factor

Coordinates

chrA06:+:22668861..22670685

Molecular Weight (calculated)

30811.4 Da

IEP (calculated)

4.186

GRAVY (calculated)

-0.556

Length

272 amino acids

Sequence
(BLAST)

001: MGEAGYAHDV ETKVSALMAS VDHLPMFGSE SGHDNGYLSA SVPLLGVNWK KRRMPRQRRS SSSFNLLYFP TLPPSSHVPT HLPAREGIPL EMEDLDGLHV
101: WTFKYRFWPN NNSRMYVLEN TGDFVSTHCV QPGDFIMFYQ YLDSCNYVIQ AKKAYEEEEE EDITNVEEDD VYTNLTRIEN TVLNDLPLPD YNQHYNNNNN
201: EKCSYVYPAF DDVTATTTNA PFVYDTTALS SNDTPLDYLG GPATTTSTNS YYSELGPFEG FGSVENISLD DF

Best Arabidopsis Sequence Match ( AT3G26790.1 )
(BLAST)

001: MMVDENVETK ASTLVASVDH GFGSGSGHDH HGLSASVPLL GVNWKKRRMP RQRRSSSSFN LLSFPPPMPP ISHVPTPLPA RKIDPRKLRF LFQKELKNSD
101: VSSLRRMILP KKAAEAHLPA LECKEGIPIR MEDLDGFHVW TFKYRYWPNN NSRMYVLENT GDFVNAHGLQ LGDFIMVYQD LYSNNYVIQA RKASEEEEVD
201: VINLEEDDVY TNLTRIENTV VNDLLLQDFN HHNNNNNNNS NSNSNKCSYY YPVIDDVTTN TESFVYDTTA LTSNDTPLDF LGGHTTTTNN YYSKFGTFDG
301: LGSVENISLD DFY

Arabidopsis Description

FUS3B3 domain-containing transcription factor FUS3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LW31]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.