Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G278000.1 | Wheat | plastid | 98.67 | 98.34 |
| TraesCS3A01G249100.2 | Wheat | nucleus | 99.0 | 76.8 |
| Os01t0713600-01 | Rice | plastid | 67.11 | 69.9 |
| HORVU3Hr1G067350.2 | Barley | nucleus | 73.42 | 59.57 |
| GSMUA_Achr3P32440_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 37.21 | 55.17 |
| GSMUA_Achr8P18070_001 | Banana | nucleus | 36.21 | 52.4 |
| KXG33236 | Sorghum | mitochondrion, nucleus | 66.11 | 50.77 |
| Zm00001d011712_P001 | Maize | mitochondrion | 65.12 | 50.0 |
| Solyc02g094460.1.1 | Tomato | nucleus | 23.92 | 26.28 |
| Bra032953.1-P | Field mustard | nucleus | 26.25 | 25.65 |
| CDY34212 | Canola | nucleus | 26.25 | 25.65 |
| CDY28525 | Canola | nucleus | 26.25 | 25.57 |
| AT3G26790.1 | Thale cress | nucleus | 26.58 | 25.56 |
| CDY13657 | Canola | nucleus | 26.58 | 25.4 |
| CDY53003 | Canola | nucleus | 26.25 | 25.16 |
| PGSC0003DMT400052167 | Potato | nucleus | 23.92 | 25.09 |
| VIT_14s0068g01290.t01 | Wine grape | nucleus | 23.59 | 24.74 |
| KRG94672 | Soybean | nucleus | 26.58 | 24.1 |
| KRH06856 | Soybean | nucleus | 26.25 | 23.37 |
| CDY66878 | Canola | nucleus | 26.25 | 21.94 |
| CDY15679 | Canola | nucleus | 25.25 | 21.78 |
| CDY46611 | Canola | nucleus | 25.91 | 21.73 |
| CDX94608 | Canola | nucleus | 24.92 | 21.49 |
| Bra025229.1-P | Field mustard | nucleus | 19.27 | 21.32 |
| Bra030087.1-P | Field mustard | nucleus | 24.25 | 21.22 |
| Bra032890.1-P | Field mustard | nucleus | 24.92 | 21.19 |
| AT1G28300.1 | Thale cress | nucleus | 24.25 | 20.11 |
| KRG89628 | Soybean | plastid | 22.26 | 17.77 |
| TraesCS7D01G326300.2 | Wheat | nucleus | 19.93 | 17.54 |
| KRG89627 | Soybean | nucleus | 21.59 | 17.24 |
| TraesCS2D01G560000.1 | Wheat | nucleus | 23.26 | 15.32 |
| TraesCS3D01G412800.1 | Wheat | nucleus | 22.92 | 9.97 |
| TraesCS2D01G105300.1 | Wheat | nucleus | 18.27 | 6.04 |
| TraesCS2D01G211600.2 | Wheat | plastid | 18.27 | 5.71 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G249100.1 | EnsemblPlantsGene:TraesCS3D01G249100 | Gene3D:2.40.330.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | InterPro:IPR003340 | InterPro:IPR015300 | PANTHER:PTHR31140 |
| PANTHER:PTHR31140:SF20 | PFAM:PF02362 | PFscan:PS50863 | SEG:seg | SMART:SM01019 | SUPFAM:SSF101936 |
| TIGR:cd10017 | MapMan:15.5.5.5 | : | : | : | : |
Description
No Description!
Coordinates
chr3D:-:348429987..348433377
Molecular Weight (calculated)
33769.0 Da
IEP (calculated)
8.857
GRAVY (calculated)
-0.499
Length
301 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAISSSSSS KRRSPSASTA SSSSGDGIGE YRPQLVTRKR RSGGRGPRGG VRWMPAIRPV NELDLNRVSL DPNHQVAGLR VILQKELRNS DISQLGRIVL
101: PKKESEAYLP ILTSKDGRSL RMHDLLNAQL WTFKYRYWPN NKSRMYVLEN TGDYVRTHNL RVGDFIMIYK DDDKNRFVIR AKKAGDDLVA SLPQFHEHIS
201: SILPIPEVDD YVSLIPPPAD ISAFVPQADE NYEMFDGIFN SLPEIPVANV RYSDFFDPFS DCMDMSNPGL NANNSANLAS HFHDERTGLS LFPNPKSGPL
301: M
101: PKKESEAYLP ILTSKDGRSL RMHDLLNAQL WTFKYRYWPN NKSRMYVLEN TGDYVRTHNL RVGDFIMIYK DDDKNRFVIR AKKAGDDLVA SLPQFHEHIS
201: SILPIPEVDD YVSLIPPPAD ISAFVPQADE NYEMFDGIFN SLPEIPVANV RYSDFFDPFS DCMDMSNPGL NANNSANLAS HFHDERTGLS LFPNPKSGPL
301: M
001: MMVDENVETK ASTLVASVDH GFGSGSGHDH HGLSASVPLL GVNWKKRRMP RQRRSSSSFN LLSFPPPMPP ISHVPTPLPA RKIDPRKLRF LFQKELKNSD
101: VSSLRRMILP KKAAEAHLPA LECKEGIPIR MEDLDGFHVW TFKYRYWPNN NSRMYVLENT GDFVNAHGLQ LGDFIMVYQD LYSNNYVIQA RKASEEEEVD
201: VINLEEDDVY TNLTRIENTV VNDLLLQDFN HHNNNNNNNS NSNSNKCSYY YPVIDDVTTN TESFVYDTTA LTSNDTPLDF LGGHTTTTNN YYSKFGTFDG
301: LGSVENISLD DFY
101: VSSLRRMILP KKAAEAHLPA LECKEGIPIR MEDLDGFHVW TFKYRYWPNN NSRMYVLENT GDFVNAHGLQ LGDFIMVYQD LYSNNYVIQA RKASEEEEVD
201: VINLEEDDVY TNLTRIENTV VNDLLLQDFN HHNNNNNNNS NSNSNKCSYY YPVIDDVTTN TESFVYDTTA LTSNDTPLDF LGGHTTTTNN YYSKFGTFDG
301: LGSVENISLD DFY
Arabidopsis Description
FUS3B3 domain-containing transcription factor FUS3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LW31]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.