Factsheet for Os01t0713600-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
nucleus 4
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G249100.1	Wheat	plastid	69.9	67.11
TraesCS3B01G278000.1	Wheat	plastid	69.55	66.56
TraesCS3A01G249100.2	Wheat	nucleus	69.2	51.55
GSMUA_Achr3P32440_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	35.64	50.74
GSMUA_Achr8P18070_001	Banana	nucleus	35.99	50.0
KXG33236	Sorghum	mitochondrion, nucleus	65.74	48.47
Zm00001d011712_P001	Maize	mitochondrion	64.71	47.7
HORVU3Hr1G067350.2	Barley	nucleus	58.13	45.28
VIT_14s0068g01290.t01	Wine grape	nucleus	26.3	26.48
Solyc02g094460.1.1	Tomato	nucleus	24.57	25.91
Bra032953.1-P	Field mustard	nucleus	27.34	25.65
CDY34212	Canola	nucleus	27.34	25.65
CDY28525	Canola	nucleus	27.34	25.57
KRG94672	Soybean	nucleus	29.07	25.3
AT3G26790.1	Thale cress	nucleus	27.34	25.24
PGSC0003DMT400052167	Potato	nucleus	24.91	25.09
KRH06856	Soybean	nucleus	29.07	24.85
CDY13657	Canola	nucleus	26.99	24.76
CDY53003	Canola	nucleus	26.64	24.52
Bra025229.1-P	Field mustard	nucleus	19.03	20.22
CDY15679	Canola	nucleus	24.22	20.06
CDY66878	Canola	nucleus	24.91	20.0
CDY46611	Canola	nucleus	24.57	19.78
CDX94608	Canola	nucleus	23.88	19.77
Bra030087.1-P	Field mustard	nucleus	23.18	19.48
Bra032890.1-P	Field mustard	nucleus	23.53	19.21
AT1G28300.1	Thale cress	nucleus	23.53	18.73
Os08t0101000-01	Rice	nucleus	22.15	17.68
KRG89628	Soybean	plastid	22.49	17.24
Os04t0676650-00	Rice	nucleus	25.95	17.12
KRG89627	Soybean	nucleus	22.15	16.98
Os04t0676600-01	Rice	nucleus	25.26	16.86
Os01t0911700-02	Rice	nucleus	27.34	10.87
Os07t0563300-01	Rice	nucleus	20.42	6.18
Os07t0679700-01	Rice	nucleus	20.07	6.11

Protein Annotations

MapMan:15.5.5.5	Gene3D:2.40.330.10	UniProt:A0A0P0V7F2	InterPro:B3_DNA-bd	ProteinID:BAS74002.1	InterPro:DNA-bd_pseudobarrel_sf
GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628
GO:GO:0009791	GO:GO:0009908	GO:GO:0009987	GO:GO:0044212	GO:GO:0048573	InterPro:IPR003340
InterPro:IPR015300	EnsemblPlantsGene:Os01g0713600	EnsemblPlants:Os01t0713600-01	PFAM:PF02362	PFscan:PS50863	PANTHER:PTHR31140
PANTHER:PTHR31140:SF20	SMART:SM01019	SUPFAM:SSF101936	UniParc:UPI000049E9EB	SEG:seg	:

Description

LATE-FLOWERING 1Transcriptional factor B3 family protein. (Os01t0713600-01)

Coordinates

chr1:+:29638075..29642862

Molecular Weight (calculated)

31859.5 Da

IEP (calculated)

8.241

GRAVY (calculated)

-0.548

Length

289 amino acids

Sequence
(BLAST)

001: MAGVTSKRRS SSASTSSSSG DGAAVSDRPR GVTRKRRSGG RCPRPAASLR PAAPRPSSHH TAGLRVILQK ELRYSDVSQL GRIVLPKKEA EAYLPILTSK
101: DGKKSLCMHD LQNAQLWTFK YRYWPNNKSR MYVLENTGDY VRTHDLQLGD SIVIYKDDEN NRFVIGAKKA GDQQAATVPQ VDEHISTLFP IFPIAQVDDY
201: LSPMAPQVDI SAFVPHADEN HEIFDGILNS LPEIPVANVR YSDFFDPFDD GMDMANTLNA NANQSASLHV TDDKSGHSLI PNPKSGPHM

Best Arabidopsis Sequence Match ( AT3G26790.1 )
(BLAST)

001: MMVDENVETK ASTLVASVDH GFGSGSGHDH HGLSASVPLL GVNWKKRRMP RQRRSSSSFN LLSFPPPMPP ISHVPTPLPA RKIDPRKLRF LFQKELKNSD
101: VSSLRRMILP KKAAEAHLPA LECKEGIPIR MEDLDGFHVW TFKYRYWPNN NSRMYVLENT GDFVNAHGLQ LGDFIMVYQD LYSNNYVIQA RKASEEEEVD
201: VINLEEDDVY TNLTRIENTV VNDLLLQDFN HHNNNNNNNS NSNSNKCSYY YPVIDDVTTN TESFVYDTTA LTSNDTPLDF LGGHTTTTNN YYSKFGTFDG
301: LGSVENISLD DFY

Arabidopsis Description

FUS3B3 domain-containing transcription factor FUS3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LW31]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.