Factsheet for Solyc02g094460.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400052167	Potato	nucleus	97.45	93.03
VIT_14s0068g01290.t01	Wine grape	nucleus	45.62	43.55
Bra032953.1-P	Field mustard	nucleus	45.99	40.91
CDY28525	Canola	nucleus	45.99	40.78
CDY34212	Canola	nucleus	45.62	40.58
AT3G26790.1	Thale cress	nucleus	44.89	39.3
KRH06856	Soybean	nucleus	47.08	38.17
KRG94672	Soybean	nucleus	45.62	37.65
CDY13657	Canola	nucleus	42.7	37.14
CDY53003	Canola	nucleus	42.34	36.94
GSMUA_Achr3P32440_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	24.82	33.5
Bra025229.1-P	Field mustard	nucleus	32.85	33.09
GSMUA_Achr8P18070_001	Banana	nucleus	24.82	32.69
Os01t0713600-01	Rice	plastid	25.91	24.57
TraesCS3B01G278000.1	Wheat	plastid	26.64	24.17
TraesCS3D01G249100.1	Wheat	plastid	26.28	23.92
Zm00001d011712_P001	Maize	mitochondrion	28.1	19.64
KXG33236	Sorghum	mitochondrion, nucleus	27.74	19.39
TraesCS3A01G249100.2	Wheat	nucleus	26.28	18.56
HORVU3Hr1G067350.2	Barley	nucleus	24.09	17.79
Solyc06g083590.2.1	Tomato	nucleus	23.72	11.23
Solyc06g083600.1.1	Tomato	nucleus	21.9	9.68
Solyc06g082520.2.1	Tomato	nucleus	18.98	6.15
Solyc10g075030.1.1	Tomato	nucleus	19.34	6.03
Solyc02g079020.2.1	Tomato	nucleus	19.34	5.08
Solyc10g006830.2.1	Tomato	cytosol, plastid	0.73	1.74

Protein Annotations

MapMan:15.5.5.5	Gene3D:2.40.330.10	InterPro:B3_DNA-bd	InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR003340	InterPro:IPR015300	UniProt:K4BDP1	PFAM:PF02362	PFscan:PS50863
PANTHER:PTHR31140	PANTHER:PTHR31140:SF23	SMART:SM01019	SUPFAM:SSF101936	EnsemblPlantsGene:Solyc02g094460.1	EnsemblPlants:Solyc02g094460.1.1
UniParc:UPI0002768C6F	SEG:seg	:	:	:	:

Description

B3 domain-containing transcription factor FUS3 [Source:Projected from Arabidopsis thaliana (AT3G26790) UniProtKB/Swiss-Prot;Acc:Q9LW31]

Coordinates

chr2:+:54974899..54976687

Molecular Weight (calculated)

31326.6 Da

IEP (calculated)

4.490

GRAVY (calculated)

-0.528

Length

274 amino acids

Sequence
(BLAST)

001: MEITEAYGVM ADGNNNNSNS MMNPPTPTKR SRSQRRRRSS LNFTSLDFLS HVPPPLPPLP PARVLEPTGF RFLFDKQLQN SDVSSLRRIV VPKKAAERYL
101: PALEIKEGFP ITMDDMDGIH VWSFRYRYWP NNSSRMYVLE NTGDFVQTHE LRQGDYFALH YNDQKQIYGI EARKAGSGAV FRGYEAEDVI LTDYAQAADD
201: GNGALMNEAE MDMSSFYFPA MDNEMGMSFI YDTSFWNEPA FDFVGGPMTY YSTNVYPMPS FGSIEDSFSV DDFY

Best Arabidopsis Sequence Match ( AT3G26790.1 )
(BLAST)

001: MMVDENVETK ASTLVASVDH GFGSGSGHDH HGLSASVPLL GVNWKKRRMP RQRRSSSSFN LLSFPPPMPP ISHVPTPLPA RKIDPRKLRF LFQKELKNSD
101: VSSLRRMILP KKAAEAHLPA LECKEGIPIR MEDLDGFHVW TFKYRYWPNN NSRMYVLENT GDFVNAHGLQ LGDFIMVYQD LYSNNYVIQA RKASEEEEVD
201: VINLEEDDVY TNLTRIENTV VNDLLLQDFN HHNNNNNNNS NSNSNKCSYY YPVIDDVTTN TESFVYDTTA LTSNDTPLDF LGGHTTTTNN YYSKFGTFDG
301: LGSVENISLD DFY

Arabidopsis Description

FUS3B3 domain-containing transcription factor FUS3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LW31]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.