CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH06856	Soybean	nucleus	93.07	91.42
VIT_14s0068g01290.t01	Wine grape	nucleus	50.9	58.88
Bra032953.1-P	Field mustard	nucleus	51.81	55.84
CDY34212	Canola	nucleus	51.81	55.84
CDY28525	Canola	nucleus	51.51	55.34
AT3G26790.1	Thale cress	nucleus	50.9	53.99
CDY53003	Canola	nucleus	48.49	51.27
CDY13657	Canola	nucleus	48.49	51.11
Solyc02g094460.1.1	Tomato	nucleus	37.65	45.62
Bra025229.1-P	Field mustard	nucleus	37.05	45.22
PGSC0003DMT400052167	Potato	nucleus	38.86	44.95
KRH37982	Soybean	cytosol, nucleus, plastid	5.42	40.91
GSMUA_Achr3P32440_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	22.29	36.45
GSMUA_Achr8P18070_001	Banana	nucleus	22.29	35.58
Os01t0713600-01	Rice	plastid	25.3	29.07
TraesCS3D01G249100.1	Wheat	plastid	24.1	26.58
TraesCS3B01G278000.1	Wheat	plastid	24.1	26.49
KXG33236	Sorghum	mitochondrion, nucleus	25.9	21.94
Zm00001d011712_P001	Maize	mitochondrion	25.6	21.68
TraesCS3A01G249100.2	Wheat	nucleus	24.4	20.88
HORVU3Hr1G067350.2	Barley	nucleus	22.89	20.49
KRG89628	Soybean	plastid	18.37	16.18
KRG89627	Soybean	nucleus	18.07	15.92
KRH46807	Soybean	nucleus	28.01	12.22
KRG99861	Soybean	nucleus	27.41	12.01
KRH72829	Soybean	nucleus	17.17	7.94
KRH17186	Soybean	nucleus	17.17	7.87
KRH10760	Soybean	nucleus	18.07	6.83
KRH21568	Soybean	nucleus	18.07	6.83
KRH30646	Soybean	nucleus	18.07	6.59
KRG98129	Soybean	nucleus	18.07	6.42
KRH76125	Soybean	nucleus	16.57	6.06
KRH65426	Soybean	nucleus	16.27	5.97

Protein Annotations

EntrezGene:100813055	MapMan:15.5.5.5	Gene3D:2.40.330.10	EMBL:ACUP02012012	InterPro:B3_DNA-bd	InterPro:DNA-bd_pseudobarrel_sf
EnsemblPlantsGene:GLYMA_19G100900	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003340	InterPro:IPR015300
UniProt:K7MXL6	EnsemblPlants:KRG94672	ProteinID:KRG94672	ProteinID:KRG94672.1	PFAM:PF02362	PFscan:PS50863
PANTHER:PTHR31140	PANTHER:PTHR31140:SF23	SMART:SM01019	SUPFAM:SSF101936	UniParc:UPI000233E020	SEG:seg

Description

hypothetical protein

Coordinates

chr19:+:34805648..34809645

Molecular Weight (calculated)

37402.9 Da

IEP (calculated)

7.026

GRAVY (calculated)

-0.565

Length

332 amino acids

Sequence
(BLAST)

001: MMMDQRQREK LLHKTEACAF VAGVVPELSL VTVPGNNTNN VNNNNNVVSH SQSNGSGRIQ ENNHHLGLVA AVTSAFGTVQ RKKRMARQRR STKPTSLMNH
101: LNNHKHNKPR SLPSPSASSS YVPLSSATLQ PAREIDQRRL RFLFQKELKN SDVSSLRRMI LPKKAAEAFL PALESKEGIV ISMDDIDGLH VWSFKYRFWP
201: NNNSRMYVLE NTGDFVNTHG LRFGDSIMVY QDSENNNYVI QAKKASDQDE FMEETSDTIN DIFLNDYEVN KPGCFNVTNP AVNDTGMSFI YETTFSNDSP
301: LDFLGGSMTN FSRIGPVETF GSVENLSLDD FY

Best Arabidopsis Sequence Match ( AT3G26790.1 )
(BLAST)

001: MMVDENVETK ASTLVASVDH GFGSGSGHDH HGLSASVPLL GVNWKKRRMP RQRRSSSSFN LLSFPPPMPP ISHVPTPLPA RKIDPRKLRF LFQKELKNSD
101: VSSLRRMILP KKAAEAHLPA LECKEGIPIR MEDLDGFHVW TFKYRYWPNN NSRMYVLENT GDFVNAHGLQ LGDFIMVYQD LYSNNYVIQA RKASEEEEVD
201: VINLEEDDVY TNLTRIENTV VNDLLLQDFN HHNNNNNNNS NSNSNKCSYY YPVIDDVTTN TESFVYDTTA LTSNDTPLDF LGGHTTTTNN YYSKFGTFDG
301: LGSVENISLD DFY

Arabidopsis Description

FUS3B3 domain-containing transcription factor FUS3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LW31]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.