Factsheet for VIT_14s0068g01290.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032953.1-P	Field mustard	nucleus	54.7	50.97
CDY34212	Canola	nucleus	54.7	50.97
KRG94672	Soybean	nucleus	58.88	50.9
CDY28525	Canola	nucleus	54.7	50.81
KRH06856	Soybean	nucleus	58.54	49.7
AT3G26790.1	Thale cress	nucleus	54.01	49.52
CDY13657	Canola	nucleus	51.57	46.98
CDY53003	Canola	nucleus	51.22	46.82
Solyc02g094460.1.1	Tomato	nucleus	43.55	45.62
PGSC0003DMT400052167	Potato	nucleus	44.6	44.6
Bra025229.1-P	Field mustard	nucleus	40.42	42.65
GSMUA_Achr3P32440_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	24.39	34.48
GSMUA_Achr8P18070_001	Banana	nucleus	24.04	33.17
Os01t0713600-01	Rice	plastid	26.48	26.3
TraesCS3D01G249100.1	Wheat	plastid	24.74	23.59
TraesCS3B01G278000.1	Wheat	plastid	24.74	23.51
VIT_10s0071g00270.t01	Wine grape	nucleus	22.3	20.98
Zm00001d011712_P001	Maize	mitochondrion	27.87	20.41
KXG33236	Sorghum	mitochondrion, nucleus	27.18	19.9
TraesCS3A01G249100.2	Wheat	nucleus	25.09	18.56
HORVU3Hr1G067350.2	Barley	nucleus	23.69	18.33
VIT_19s0014g03560.t01	Wine grape	nucleus	14.29	16.47
VIT_07s0005g05400.t01	Wine grape	nucleus	31.01	12.14
VIT_00s0181g00260.t01	Wine grape	nucleus	19.16	9.57
VIT_06s0004g08100.t01	Wine grape	nucleus	19.51	6.44
VIT_08s0058g01300.t01	Wine grape	nucleus	19.16	5.95

Protein Annotations

EntrezGene:100244687	wikigene:100244687	MapMan:15.5.5.5	Gene3D:2.40.330.10	InterPro:B3_DNA-bd	ProteinID:CBI21292
ProteinID:CBI21292.3	UniProt:D7SVJ3	InterPro:DNA-bd_pseudobarrel_sf	EMBL:FN595232	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR003340	InterPro:IPR015300	EntrezGene:LOC100244687	wikigene:LOC100244687	PFAM:PF02362
PFscan:PS50863	PANTHER:PTHR31140	PANTHER:PTHR31140:SF23	SMART:SM01019	SUPFAM:SSF101936	UniParc:UPI0001BE1CF5
ArrayExpress:VIT_14s0068g01290	EnsemblPlantsGene:VIT_14s0068g01290	EnsemblPlants:VIT_14s0068g01290.t01	RefSeq:XP_002275489	RefSeq:XP_002275489.1	RefSeq:XP_002275489.2
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr14:-:25028976..25030714

Molecular Weight (calculated)

32122.0 Da

IEP (calculated)

6.406

GRAVY (calculated)

-0.399

Length

287 amino acids

Sequence
(BLAST)

001: MMEQNEAYAL MAGVGGELSF VTVRGDKTHE GSDRSPPTRD LVAASSFGVQ GRKRMPRQRR SSAINLLTFA PSTSPHVPPP PPARAIDRKW LRFLFEKELK
101: NSDVGSLRRM VLPKKSAETH LPLLEAKEGI LITMYDLDGQ HVWNFKYRFW PNNNSRMYVL ENTGEFVNVH GLQLGDYIML YHDGQTQSLV IEARKASEKN
201: LHADLSKNIA VSDLFLQDLE ANRSNYFLAM DTGTSFVYET TFSNDSPLDF LGGSMTNYPG GSVSNYSRFG ALEGFGSVES LSLDDFC

Best Arabidopsis Sequence Match ( AT3G26790.1 )
(BLAST)

001: MMVDENVETK ASTLVASVDH GFGSGSGHDH HGLSASVPLL GVNWKKRRMP RQRRSSSSFN LLSFPPPMPP ISHVPTPLPA RKIDPRKLRF LFQKELKNSD
101: VSSLRRMILP KKAAEAHLPA LECKEGIPIR MEDLDGFHVW TFKYRYWPNN NSRMYVLENT GDFVNAHGLQ LGDFIMVYQD LYSNNYVIQA RKASEEEEVD
201: VINLEEDDVY TNLTRIENTV VNDLLLQDFN HHNNNNNNNS NSNSNKCSYY YPVIDDVTTN TESFVYDTTA LTSNDTPLDF LGGHTTTTNN YYSKFGTFDG
301: LGSVENISLD DFY

Arabidopsis Description

FUS3B3 domain-containing transcription factor FUS3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LW31]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.