Factsheet for Bra032953.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34212	Canola	nucleus	99.35	99.35
CDY28525	Canola	nucleus	98.7	98.38
AT3G26790.1	Thale cress	nucleus	82.79	81.47
Bra025229.1-P	Field mustard	nucleus	65.58	74.26
VIT_14s0068g01290.t01	Wine grape	nucleus	50.97	54.7
KRG94672	Soybean	nucleus	55.84	51.81
KRH06856	Soybean	nucleus	56.49	51.48
Solyc02g094460.1.1	Tomato	nucleus	40.91	45.99
PGSC0003DMT400052167	Potato	nucleus	41.23	44.25
GSMUA_Achr3P32440_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	23.7	35.96
GSMUA_Achr8P18070_001	Banana	nucleus	23.7	35.1
Os01t0713600-01	Rice	plastid	25.65	27.34
TraesCS3D01G249100.1	Wheat	plastid	25.65	26.25
TraesCS3B01G278000.1	Wheat	plastid	25.65	26.16
Zm00001d011712_P001	Maize	mitochondrion	27.92	21.94
KXG33236	Sorghum	mitochondrion, nucleus	27.92	21.94
TraesCS3A01G249100.2	Wheat	nucleus	25.65	20.36
HORVU3Hr1G067350.2	Barley	nucleus	24.03	19.95
Bra032890.1-P	Field mustard	nucleus	21.43	18.64
Bra030087.1-P	Field mustard	nucleus	20.78	18.6
Bra013248.1-P	Field mustard	nucleus	26.3	11.3
Bra023968.1-P	Field mustard	nucleus	21.1	8.44
Bra021635.1-P	Field mustard	nucleus	21.1	8.4
Bra022801.1-P	Field mustard	nucleus	21.1	8.3
Bra013535.1-P	Field mustard	nucleus	18.51	8.15
Bra018313.1-P	Field mustard	nucleus	20.13	7.85

Protein Annotations

MapMan:15.5.5.5	Gene3D:2.40.330.10	InterPro:B3_DNA-bd	EnsemblPlantsGene:Bra032953	EnsemblPlants:Bra032953.1	EnsemblPlants:Bra032953.1-P
InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003340	InterPro:IPR015300
UniProt:M4EVX0	PFAM:PF02362	PFscan:PS50863	PANTHER:PTHR31140	PANTHER:PTHR31140:SF23	SMART:SM01019
SUPFAM:SSF101936	UniParc:UPI00025457D9	SEG:seg	:	:	:

Description

AT3G26790 (E=1e-125) FUS3 | FUS3 (FUSCA 3); DNA binding / transcription activator/ transcription factor

Coordinates

chrA02:+:22322611..22324504

Molecular Weight (calculated)

34843.0 Da

IEP (calculated)

6.439

GRAVY (calculated)

-0.490

Length

308 amino acids

Sequence
(BLAST)

001: MMMDEAHDVE TKASALIAGV HHRPGFGSGS GHVHGLSASV PLLGVNWKRR RMPRQRRSSS SLNLLSFPTL PPSSSHVPTP LPARKIDTRR LRFLFQKELK
101: NSDVSSLRRM ILPKKAAEAH LPALESKEGI PIKMEDLDGL HVWTFKYRYW PNNNSRMYVL ENTGDFVNAH GLQQGDFIMV YQNLYPNNYV IQARKASEEE
201: NLTSFEEDDV YTDLTKIENT VVNDLLIQDY NHHYNSDNGK CSYYYPIIDD VTATATTASF VYDTTALTSN DTPLDFLGGL TMRTNNYYSK VGSFEGFGSV
301: ENISLDDF

Best Arabidopsis Sequence Match ( AT3G26790.1 )
(BLAST)

001: MMVDENVETK ASTLVASVDH GFGSGSGHDH HGLSASVPLL GVNWKKRRMP RQRRSSSSFN LLSFPPPMPP ISHVPTPLPA RKIDPRKLRF LFQKELKNSD
101: VSSLRRMILP KKAAEAHLPA LECKEGIPIR MEDLDGFHVW TFKYRYWPNN NSRMYVLENT GDFVNAHGLQ LGDFIMVYQD LYSNNYVIQA RKASEEEEVD
201: VINLEEDDVY TNLTRIENTV VNDLLLQDFN HHNNNNNNNS NSNSNKCSYY YPVIDDVTTN TESFVYDTTA LTSNDTPLDF LGGHTTTTNN YYSKFGTFDG
301: LGSVENISLD DFY

Arabidopsis Description

FUS3B3 domain-containing transcription factor FUS3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LW31]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.