Factsheet for TraesCS3B01G278000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G249100.1	Wheat	plastid	98.34	98.67
TraesCS3A01G249100.2	Wheat	nucleus	98.01	76.29
Os01t0713600-01	Rice	plastid	66.56	69.55
HORVU3Hr1G067350.2	Barley	nucleus	72.85	59.3
GSMUA_Achr3P32440_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	37.42	55.66
GSMUA_Achr8P18070_001	Banana	nucleus	36.09	52.4
KXG33236	Sorghum	mitochondrion, nucleus	65.56	50.51
Zm00001d011712_P001	Maize	mitochondrion	64.57	49.74
Solyc02g094460.1.1	Tomato	nucleus	24.17	26.64
Bra032953.1-P	Field mustard	nucleus	26.16	25.65
CDY34212	Canola	nucleus	26.16	25.65
CDY28525	Canola	nucleus	26.16	25.57
AT3G26790.1	Thale cress	nucleus	26.49	25.56
PGSC0003DMT400052167	Potato	nucleus	24.17	25.44
CDY13657	Canola	nucleus	26.49	25.4
CDY53003	Canola	nucleus	26.16	25.16
VIT_14s0068g01290.t01	Wine grape	nucleus	23.51	24.74
KRG94672	Soybean	nucleus	26.49	24.1
KRH06856	Soybean	nucleus	26.16	23.37
CDY66878	Canola	nucleus	26.16	21.94
CDY15679	Canola	nucleus	25.17	21.78
CDY46611	Canola	nucleus	25.83	21.73
CDX94608	Canola	nucleus	24.83	21.49
Bra025229.1-P	Field mustard	nucleus	19.21	21.32
Bra030087.1-P	Field mustard	nucleus	24.17	21.22
Bra032890.1-P	Field mustard	nucleus	24.83	21.19
AT1G28300.1	Thale cress	nucleus	24.17	20.11
KRG89628	Soybean	plastid	22.19	17.77
TraesCS7B01G230100.2	Wheat	nucleus	19.87	17.49
KRG89627	Soybean	nucleus	21.52	17.24
TraesCS2B01G589800.2	Wheat	nucleus	23.18	15.45
TraesCS3B01G452200.1	Wheat	nucleus	23.51	10.32
TraesCS2B01G122500.1	Wheat	nucleus	19.21	6.11
TraesCS2B01G231800.1	Wheat	plastid	17.88	5.62

Protein Annotations

EnsemblPlants:TraesCS3B01G278000.1	EnsemblPlantsGene:TraesCS3B01G278000	Gene3D:2.40.330.10	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:B3_DNA-bd	InterPro:DNA-bd_pseudobarrel_sf	InterPro:IPR003340	InterPro:IPR015300	PANTHER:PTHR31140
PANTHER:PTHR31140:SF20	PFAM:PF02362	PFscan:PS50863	SEG:seg	SMART:SM01019	SUPFAM:SSF101936
TIGR:cd10017	MapMan:15.5.5.5	:	:	:	:

Description

No Description!

Coordinates

chr3B:-:448231199..448234631

Molecular Weight (calculated)

33829.1 Da

IEP (calculated)

8.407

GRAVY (calculated)

-0.497

Length

302 amino acids

Sequence
(BLAST)

001: MAAISSSSSS SKRRSPSAST TSSSSGDGIG EYRPQLVTRK RRSGGRGPRG GVRWMPAIRP VNELDLNRVA LDPNHQVAGL RVILQKELRN SDISQLGRIV
101: LPKKESEAYL PILTSKDGRS LRMHDLLNAQ LWTFKYRYWP NNKSRMYVLE NTGDYVRTHN LRVGDFIMIY KDDDKNRFVI RAKKAGDDLV ASLPQFHEHI
201: SSILPIPEVD DYVSLIPPPA DISAFVPQAD ENYEMFDGIF NSLPEIPVAN VRYSDFFDPF SDCMDMSNPG LNANNSANLG SHFHDERTGL SLFPNPTSGP
301: LM

Best Arabidopsis Sequence Match ( AT3G26790.1 )
(BLAST)

001: MMVDENVETK ASTLVASVDH GFGSGSGHDH HGLSASVPLL GVNWKKRRMP RQRRSSSSFN LLSFPPPMPP ISHVPTPLPA RKIDPRKLRF LFQKELKNSD
101: VSSLRRMILP KKAAEAHLPA LECKEGIPIR MEDLDGFHVW TFKYRYWPNN NSRMYVLENT GDFVNAHGLQ LGDFIMVYQD LYSNNYVIQA RKASEEEEVD
201: VINLEEDDVY TNLTRIENTV VNDLLLQDFN HHNNNNNNNS NSNSNKCSYY YPVIDDVTTN TESFVYDTTA LTSNDTPLDF LGGHTTTTNN YYSKFGTFDG
301: LGSVENISLD DFY

Arabidopsis Description

FUS3B3 domain-containing transcription factor FUS3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LW31]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.