Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032953.1-P | Field mustard | nucleus | 99.35 | 99.35 |
| CDY28525 | Canola | nucleus | 98.7 | 98.38 |
| AT3G26790.1 | Thale cress | nucleus | 83.12 | 81.79 |
| CDY53003 | Canola | nucleus | 79.22 | 77.71 |
| CDY13657 | Canola | nucleus | 79.22 | 77.46 |
| VIT_14s0068g01290.t01 | Wine grape | nucleus | 50.97 | 54.7 |
| KRG94672 | Soybean | nucleus | 55.84 | 51.81 |
| KRH06856 | Soybean | nucleus | 56.49 | 51.48 |
| Solyc02g094460.1.1 | Tomato | nucleus | 40.58 | 45.62 |
| PGSC0003DMT400052167 | Potato | nucleus | 40.91 | 43.9 |
| GSMUA_Achr3P32440_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 23.7 | 35.96 |
| GSMUA_Achr8P18070_001 | Banana | nucleus | 23.7 | 35.1 |
| Os01t0713600-01 | Rice | plastid | 25.65 | 27.34 |
| TraesCS3D01G249100.1 | Wheat | plastid | 25.65 | 26.25 |
| TraesCS3B01G278000.1 | Wheat | plastid | 25.65 | 26.16 |
| KXG33236 | Sorghum | mitochondrion, nucleus | 27.92 | 21.94 |
| Zm00001d011712_P001 | Maize | mitochondrion | 27.92 | 21.94 |
| TraesCS3A01G249100.2 | Wheat | nucleus | 25.65 | 20.36 |
| HORVU3Hr1G067350.2 | Barley | nucleus | 24.03 | 19.95 |
| CDY66878 | Canola | nucleus | 22.73 | 19.44 |
| CDY46611 | Canola | nucleus | 22.4 | 19.22 |
| CDY15679 | Canola | nucleus | 21.75 | 19.2 |
| CDX94608 | Canola | nucleus | 21.75 | 19.2 |
| CDY15121 | Canola | nucleus | 25.97 | 11.9 |
| CDX93029 | Canola | nucleus | 25.97 | 11.14 |
| CDY29672 | Canola | nucleus | 21.75 | 8.5 |
| CDX72340 | Canola | nucleus | 21.1 | 8.45 |
| CDY13468 | Canola | nucleus | 21.1 | 8.44 |
| CDX84832 | Canola | nucleus | 21.1 | 8.28 |
| CDY02066 | Canola | nucleus | 20.78 | 8.16 |
| CDY10738 | Canola | nucleus | 20.78 | 8.13 |
| CDX97828 | Canola | nucleus | 20.13 | 8.13 |
| CDY23997 | Canola | nucleus | 20.78 | 8.07 |
| CDX79071 | Canola | nucleus | 18.83 | 8.03 |
| CDX82834 | Canola | nucleus | 18.83 | 8.02 |
| CDX68809 | Canola | cytosol | 1.62 | 3.82 |
Protein Annotations
| MapMan:15.5.5.5 | Gene3D:2.40.330.10 | GO:A0A078H989 | UniProt:A0A078H989 | InterPro:B3_DNA-bd | EnsemblPlants:CDY34212 |
| ProteinID:CDY34212 | ProteinID:CDY34212.1 | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSBRNA2T00056206001 | InterPro:IPR003340 | InterPro:IPR015300 | PFAM:PF02362 | PFscan:PS50863 | PANTHER:PTHR31140 |
| PANTHER:PTHR31140:SF23 | SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI0004EE7B48 | SEG:seg | : |
Description
BnaA02g28280DBnaA02g28280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H989]
Coordinates
chrLK032330:+:403522..405735
Molecular Weight (calculated)
34834.9 Da
IEP (calculated)
6.439
GRAVY (calculated)
-0.508
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: MMMDEAHDVE TKASALIAGV HHRPGFGSGS GHGHGLSASV PLLGVNWKRR RMPRQRRSSS SFNLLSFPTL PPSSSHVPTP LPARKIDTRR LRFLFQKELK
101: NSDVSSLRRM ILPKKAAEAH LPALESKEGI PIKMEDLDGL HVWTFKYRYW PNNNSRMYVL ENTGDFVNAH GLQQGDFIMV YQNLYPNNYV IQARKASEEE
201: NLTSFEEDDV YTDLTKIENT VVNDLLIQDY NHHYNSDNGK CSYYYPIIDD VTATATTASF VYDTTALTSN DTPLDFLGGL TMRTNNYYSK VGSFEGFGSV
301: ENISLDDF
101: NSDVSSLRRM ILPKKAAEAH LPALESKEGI PIKMEDLDGL HVWTFKYRYW PNNNSRMYVL ENTGDFVNAH GLQQGDFIMV YQNLYPNNYV IQARKASEEE
201: NLTSFEEDDV YTDLTKIENT VVNDLLIQDY NHHYNSDNGK CSYYYPIIDD VTATATTASF VYDTTALTSN DTPLDFLGGL TMRTNNYYSK VGSFEGFGSV
301: ENISLDDF
001: MMVDENVETK ASTLVASVDH GFGSGSGHDH HGLSASVPLL GVNWKKRRMP RQRRSSSSFN LLSFPPPMPP ISHVPTPLPA RKIDPRKLRF LFQKELKNSD
101: VSSLRRMILP KKAAEAHLPA LECKEGIPIR MEDLDGFHVW TFKYRYWPNN NSRMYVLENT GDFVNAHGLQ LGDFIMVYQD LYSNNYVIQA RKASEEEEVD
201: VINLEEDDVY TNLTRIENTV VNDLLLQDFN HHNNNNNNNS NSNSNKCSYY YPVIDDVTTN TESFVYDTTA LTSNDTPLDF LGGHTTTTNN YYSKFGTFDG
301: LGSVENISLD DFY
101: VSSLRRMILP KKAAEAHLPA LECKEGIPIR MEDLDGFHVW TFKYRYWPNN NSRMYVLENT GDFVNAHGLQ LGDFIMVYQD LYSNNYVIQA RKASEEEEVD
201: VINLEEDDVY TNLTRIENTV VNDLLLQDFN HHNNNNNNNS NSNSNKCSYY YPVIDDVTTN TESFVYDTTA LTSNDTPLDF LGGHTTTTNN YYSKFGTFDG
301: LGSVENISLD DFY
Arabidopsis Description
FUS3B3 domain-containing transcription factor FUS3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LW31]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.