CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94672	Soybean	nucleus	91.42	93.07
VIT_14s0068g01290.t01	Wine grape	nucleus	49.7	58.54
Bra032953.1-P	Field mustard	nucleus	51.48	56.49
CDY34212	Canola	nucleus	51.48	56.49
CDY28525	Canola	nucleus	51.18	55.99
AT3G26790.1	Thale cress	nucleus	50.59	54.63
CDY53003	Canola	nucleus	48.22	51.91
CDY13657	Canola	nucleus	48.22	51.75
Solyc02g094460.1.1	Tomato	nucleus	38.17	47.08
PGSC0003DMT400052167	Potato	nucleus	39.35	46.34
Bra025229.1-P	Field mustard	nucleus	36.98	45.96
KRH37982	Soybean	cytosol, nucleus, plastid	5.33	40.91
GSMUA_Achr8P18070_001	Banana	nucleus	22.19	36.06
GSMUA_Achr3P32440_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	21.6	35.96
Os01t0713600-01	Rice	plastid	24.85	29.07
TraesCS3D01G249100.1	Wheat	plastid	23.37	26.25
TraesCS3B01G278000.1	Wheat	plastid	23.37	26.16
KXG33236	Sorghum	mitochondrion, nucleus	25.15	21.68
Zm00001d011712_P001	Maize	mitochondrion	24.85	21.43
TraesCS3A01G249100.2	Wheat	nucleus	23.96	20.88
HORVU3Hr1G067350.2	Barley	nucleus	22.49	20.49
KRG89628	Soybean	plastid	18.34	16.45
KRG89627	Soybean	nucleus	18.05	16.18
KRH46807	Soybean	nucleus	26.92	11.96
KRG99861	Soybean	nucleus	26.33	11.74
KRH17186	Soybean	nucleus	16.27	7.6
KRH72829	Soybean	nucleus	15.98	7.52
KRH10760	Soybean	nucleus	17.46	6.72
KRH21568	Soybean	nucleus	17.46	6.71
KRH30646	Soybean	nucleus	17.16	6.37
KRG98129	Soybean	nucleus	17.16	6.2
KRH76125	Soybean	nucleus	16.27	6.06
KRH65426	Soybean	nucleus	15.98	5.97

Protein Annotations

EntrezGene:100783961	MapMan:15.5.5.5	Gene3D:2.40.330.10	EMBL:ACUP02009890	InterPro:B3_DNA-bd	InterPro:DNA-bd_pseudobarrel_sf
EnsemblPlantsGene:GLYMA_16G050300	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003340	InterPro:IPR015300
UniProt:K7MFA4	EnsemblPlants:KRH06856	ProteinID:KRH06856	ProteinID:KRH06856.1	PFAM:PF02362	PFscan:PS50863
PANTHER:PTHR31140	PANTHER:PTHR31140:SF23	SMART:SM01019	SUPFAM:SSF101936	UniParc:UPI000233DF03	SEG:seg

Description

hypothetical protein

Coordinates

chr16:-:4817240..4821114

Molecular Weight (calculated)

38076.6 Da

IEP (calculated)

6.850

GRAVY (calculated)

-0.570

Length

338 amino acids

Sequence
(BLAST)

001: MMMDPRQREK LLHKTEACAF VAGVVPELSL VTVPGNNNNT NNVNNNNNNV SHSQSHRSGR IHENHHHHHL GLVAAVTTTF GTVHRKKRMA RQRRSTNPTL
101: LMNPLINNNN NKSGSSLPSP STASSSHVPL SSSTLPPARE IDQRRLRFLF QKELKNSDVS SLRRMILPKK AAEAFLPALE SKEGIVISMD DIDGLHVWSF
201: KYRFWPNNNS RMYVLENTGD FVNTHGLRFG DSILVYQDSE NNNYVIQAKK ASDQDEFMEE TSDTINDIFL NDYEVNKPGC FNVTYPAVND TGMSFIYETT
301: FSNDSPLDFL GGSMTNFSRI GPVETFGSVE NLSLDDFY

Best Arabidopsis Sequence Match ( AT3G26790.1 )
(BLAST)

001: MMVDENVETK ASTLVASVDH GFGSGSGHDH HGLSASVPLL GVNWKKRRMP RQRRSSSSFN LLSFPPPMPP ISHVPTPLPA RKIDPRKLRF LFQKELKNSD
101: VSSLRRMILP KKAAEAHLPA LECKEGIPIR MEDLDGFHVW TFKYRYWPNN NSRMYVLENT GDFVNAHGLQ LGDFIMVYQD LYSNNYVIQA RKASEEEEVD
201: VINLEEDDVY TNLTRIENTV VNDLLLQDFN HHNNNNNNNS NSNSNKCSYY YPVIDDVTTN TESFVYDTTA LTSNDTPLDF LGGHTTTTNN YYSKFGTFDG
301: LGSVENISLD DFY

Arabidopsis Description

FUS3B3 domain-containing transcription factor FUS3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LW31]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.