Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G30470.1 | KRG93437 | AT3G01320.1 | 19962994 |
| AT2G30470.1 | KRH18559 | AT3G01320.1 | 19962994 |
| AT2G30470.1 | KRH18561 | AT3G01320.1 | 19962994 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH30646 | Soybean | nucleus | 90.05 | 92.43 |
| KRH37982 | Soybean | cytosol, nucleus, plastid | 3.64 | 77.27 |
| KRH72829 | Soybean | nucleus | 47.59 | 61.98 |
| KRH17186 | Soybean | nucleus | 47.27 | 61.05 |
| VIT_06s0004g08100.t01 | Wine grape | nucleus | 48.98 | 52.7 |
| CDY02066 | Canola | nucleus | 43.21 | 51.53 |
| KRH65426 | Soybean | nucleus | 49.73 | 51.38 |
| AT2G30470.1 | Thale cress | nucleus | 43.32 | 51.27 |
| CDY10738 | Canola | nucleus | 42.67 | 50.7 |
| Bra018313.1-P | Field mustard | nucleus | 42.78 | 50.63 |
| KRH76125 | Soybean | nucleus | 49.09 | 50.55 |
| CDX84832 | Canola | nucleus | 42.35 | 50.45 |
| Solyc06g082520.2.1 | Tomato | nucleus | 45.56 | 50.41 |
| CDX97828 | Canola | nucleus | 41.07 | 50.33 |
| Bra022801.1-P | Field mustard | nucleus | 42.14 | 50.32 |
| Bra021635.1-P | Field mustard | nucleus | 40.96 | 49.48 |
| CDY23997 | Canola | nucleus | 41.71 | 49.18 |
| CDY29672 | Canola | nucleus | 40.75 | 48.35 |
| GSMUA_Achr5P27930_001 | Banana | nucleus | 29.3 | 47.24 |
| GSMUA_Achr8P01750_001 | Banana | nucleus | 42.46 | 46.32 |
| TraesCS2D01G105300.1 | Wheat | nucleus | 42.03 | 43.14 |
| Os07t0679700-01 | Rice | nucleus | 43.1 | 42.47 |
| TraesCS2A01G105600.1 | Wheat | nucleus | 42.89 | 42.26 |
| TraesCS2B01G122500.1 | Wheat | nucleus | 42.67 | 42.0 |
| EER99914 | Sorghum | nucleus | 42.78 | 41.8 |
| Zm00001d022440_P005 | Maize | plastid | 42.35 | 41.12 |
| KRH10760 | Soybean | nucleus | 37.22 | 39.64 |
| KRH21568 | Soybean | nucleus | 36.9 | 39.25 |
| HORVU2Hr1G017760.4 | Barley | plastid | 42.14 | 38.03 |
| Zm00001d007173_P003 | Maize | mitochondrion, nucleus | 40.86 | 37.75 |
| Zm00001d037893_P001 | Maize | mitochondrion | 6.84 | 22.86 |
| PGSC0003DMT400057590 | Potato | nucleus | 11.12 | 22.51 |
| Zm00001d045970_P001 | Maize | mitochondrion | 5.99 | 21.71 |
| Zm00001d038148_P001 | Maize | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 6.1 | 19.45 |
| KRG94672 | Soybean | nucleus | 6.42 | 18.07 |
| KRH06856 | Soybean | nucleus | 6.2 | 17.16 |
| KRG89627 | Soybean | nucleus | 6.63 | 16.45 |
| KRG89628 | Soybean | plastid | 6.42 | 15.92 |
| Zm00001d029836_P001 | Maize | plastid | 1.28 | 13.64 |
| KRG99861 | Soybean | nucleus | 8.98 | 11.08 |
| KRH46807 | Soybean | nucleus | 8.77 | 10.78 |
Protein Annotations
| MapMan:15.5.5.4 | Gene3D:2.40.330.10 | Gene3D:3.30.40.100 | EMBL:ACUP02010845 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf |
| EnsemblPlantsGene:GLYMA_18G052100 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003340 |
| InterPro:IPR011124 | InterPro:IPR015300 | UniProt:K7MQ27 | EnsemblPlants:KRG98129 | ProteinID:KRG98129 | ProteinID:KRG98129.1 |
| ProteinID:KRG98130.1 | PFAM:PF02362 | PFAM:PF07496 | PFscan:PS50863 | PFscan:PS51050 | PANTHER:PTHR23336 |
| PANTHER:PTHR23336:SF28 | SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI000295AFA0 | InterPro:Znf_CW | SEG:seg |
Description
hypothetical protein
Coordinates
chr18:+:4503910..4512049
Molecular Weight (calculated)
103156.0 Da
IEP (calculated)
7.477
GRAVY (calculated)
-0.635
Length
935 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSNICVVNG SCTHEWRKGW PLRSGGFAQL CCKCGFMEEW KGDILDPFST IPDKVLNCGC GCGFVAIIDI AGKCRSAYEN SVFCNKFHCQ QTGWRECNFC
101: NKPIHCGCIV SRSLFEYLDF GGIGCVSCVN TTQLSMMRNM ENPNVTVLSI KNNAGDRHSA HFDGRLPVGG VDEGKLMQFC KIIEASESSR WNHAQRDGII
201: AHRGQKNQEA KSSFREVEIG FSNVMNPSVQ SLTFATLENN RSTWEIKNMH ESNTKPSLSM YLGNASGNNS VPPSAGEAVE GRLDGKTSPP FQGSRSIFPK
301: PLKNGLTMNM ETNKGTMSQS RVARPPADGR GKNQLLPRYW PRITDEELER LAGDLKSTVV PLFEKVLSAS DAGRIGRLVL PKACAEAYFP PISQSEGVPL
401: RMQDVKGNEW TFQFRFWPNN NSRMYVLEGV TPCIQAMQLC AGDTVTFSRI DPGGKLVMGF RKASNSTDTQ DASTSAQSNS AKGTVSSGTE NLPSGSNNAD
501: LLHSLTGNVE CHLNGHTEHL HLGTGTAGLL KTENNEMTNS SSPQQQISVL EKKRTRNIGP KSKRLLIDNE DAMELKLTWE EAQDLLRPPP SVKPSIVTIE
601: DQVIEEYDEP PVFGKRTIFS ACSSGGKEQW AQCDDCSKWR KLPVDALLPP KWTCCENVWD SSRCSCSAPE ELSSREIENL LKNNKDFKKR RIVESSKSIQ
701: EHEPSGLDAL ASAAVLGENL IDTAESSAGV TTKHPRHRPG CSCIVCIQPP SGKGRHKPTC TCNVCMTVKR RFKTLMLRKK KRQSEREADA AQKDQTLPKD
801: ELDTNGASRD DTSQLEKEAG LKSQHEVGGS SAGQIDLNSH PNREDMQVET TGLNMSSHLE PATNHTVGEF MNQNGLRNFN NEVQTGQNSS LHTPKSNGEG
901: QRYFSDGRCF ASIMWNQERK DEVHSQTNQS QNNLS
101: NKPIHCGCIV SRSLFEYLDF GGIGCVSCVN TTQLSMMRNM ENPNVTVLSI KNNAGDRHSA HFDGRLPVGG VDEGKLMQFC KIIEASESSR WNHAQRDGII
201: AHRGQKNQEA KSSFREVEIG FSNVMNPSVQ SLTFATLENN RSTWEIKNMH ESNTKPSLSM YLGNASGNNS VPPSAGEAVE GRLDGKTSPP FQGSRSIFPK
301: PLKNGLTMNM ETNKGTMSQS RVARPPADGR GKNQLLPRYW PRITDEELER LAGDLKSTVV PLFEKVLSAS DAGRIGRLVL PKACAEAYFP PISQSEGVPL
401: RMQDVKGNEW TFQFRFWPNN NSRMYVLEGV TPCIQAMQLC AGDTVTFSRI DPGGKLVMGF RKASNSTDTQ DASTSAQSNS AKGTVSSGTE NLPSGSNNAD
501: LLHSLTGNVE CHLNGHTEHL HLGTGTAGLL KTENNEMTNS SSPQQQISVL EKKRTRNIGP KSKRLLIDNE DAMELKLTWE EAQDLLRPPP SVKPSIVTIE
601: DQVIEEYDEP PVFGKRTIFS ACSSGGKEQW AQCDDCSKWR KLPVDALLPP KWTCCENVWD SSRCSCSAPE ELSSREIENL LKNNKDFKKR RIVESSKSIQ
701: EHEPSGLDAL ASAAVLGENL IDTAESSAGV TTKHPRHRPG CSCIVCIQPP SGKGRHKPTC TCNVCMTVKR RFKTLMLRKK KRQSEREADA AQKDQTLPKD
801: ELDTNGASRD DTSQLEKEAG LKSQHEVGGS SAGQIDLNSH PNREDMQVET TGLNMSSHLE PATNHTVGEF MNQNGLRNFN NEVQTGQNSS LHTPKSNGEG
901: QRYFSDGRCF ASIMWNQERK DEVHSQTNQS QNNLS
001: MFEVKMGSKM CMNASCGTTS TVEWKKGWPL RSGLLADLCY RCGSAYESSL FCEQFHKDQS GWRECYLCSK RLHCGCIASK VTIELMDYGG VGCSTCACCH
101: QLNLNTRGEN PGVFSRLPMK TLADRQHVNG ESGGRNEGDL FSQPLVMGGD KREEFMPHRG FGKLMSPEST TTGHRLDAAG EMHESSPLQP SLNMGLAVNP
201: FSPSFATEAV EGMKHISPSQ SNMVHCSASN ILQKPSRPAI STPPVASKSA QARIGRPPVE GRGRGHLLPR YWPKYTDKEV QQISGNLNLN IVPLFEKTLS
301: ASDAGRIGRL VLPKACAEAY FPPISQSEGI PLKIQDVRGR EWTFQFRYWP NNNSRMYVLE GVTPCIQSMM LQAGDTVTFS RVDPGGKLIM GSRKAANAGD
401: MQGCGLTNGT STEDTSSSGV TENPPSINGS SCISLIPKEL NGMPENLNSE TNGGRIGDDP TRVKEKKRTR TIGAKNKRLL LHSEESMELR LTWEEAQDLL
501: RPSPSVKPTI VVIEEQEIEE YDEPPVFGKR TIVTTKPSGE QERWATCDDC SKWRRLPVDA LLSFKWTCID NVWDVSRCSC SAPEESLKEL ENVLKVGREH
601: KKRRTGESQA AKSQQEPCGL DALASAAVLG DTIGEPEVAT TTRHPRHRAG CSCIVCIQPP SGKGRHKPTC GCTVCSTVKR RFKTLMMRRK KKQLERDVTA
701: AEDKKKKDME LAESDKSKEE KEVNTARIDL NSDPYNKEDV EAVAVEKEES RKRAIGQCSG VVAQDASDVL GVTELEGEGK NVREEPRVSS
101: QLNLNTRGEN PGVFSRLPMK TLADRQHVNG ESGGRNEGDL FSQPLVMGGD KREEFMPHRG FGKLMSPEST TTGHRLDAAG EMHESSPLQP SLNMGLAVNP
201: FSPSFATEAV EGMKHISPSQ SNMVHCSASN ILQKPSRPAI STPPVASKSA QARIGRPPVE GRGRGHLLPR YWPKYTDKEV QQISGNLNLN IVPLFEKTLS
301: ASDAGRIGRL VLPKACAEAY FPPISQSEGI PLKIQDVRGR EWTFQFRYWP NNNSRMYVLE GVTPCIQSMM LQAGDTVTFS RVDPGGKLIM GSRKAANAGD
401: MQGCGLTNGT STEDTSSSGV TENPPSINGS SCISLIPKEL NGMPENLNSE TNGGRIGDDP TRVKEKKRTR TIGAKNKRLL LHSEESMELR LTWEEAQDLL
501: RPSPSVKPTI VVIEEQEIEE YDEPPVFGKR TIVTTKPSGE QERWATCDDC SKWRRLPVDA LLSFKWTCID NVWDVSRCSC SAPEESLKEL ENVLKVGREH
601: KKRRTGESQA AKSQQEPCGL DALASAAVLG DTIGEPEVAT TTRHPRHRAG CSCIVCIQPP SGKGRHKPTC GCTVCSTVKR RFKTLMMRRK KKQLERDVTA
701: AEDKKKKDME LAESDKSKEE KEVNTARIDL NSDPYNKEDV EAVAVEKEES RKRAIGQCSG VVAQDASDVL GVTELEGEGK NVREEPRVSS
Arabidopsis Description
VAL1B3 domain-containing transcription repressor VAL1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4L5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.