Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- cytosol 1
- extracellular 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d012162_P002 | Maize | mitochondrion | 98.86 | 49.15 |
| Zm00001d045970_P001 | Maize | mitochondrion | 90.91 | 31.01 |
| Zm00001d037893_P001 | Maize | mitochondrion | 93.18 | 29.29 |
| Zm00001d038148_P001 | Maize | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 90.91 | 27.3 |
| Zm00001d022440_P005 | Maize | plastid | 93.18 | 8.52 |
| Zm00001d007173_P003 | Maize | mitochondrion, nucleus | 86.36 | 7.51 |
| TraesCS2D01G105300.1 | Wheat | nucleus | 64.77 | 6.26 |
| TraesCS2A01G105600.1 | Wheat | nucleus | 65.91 | 6.11 |
| TraesCS2B01G122500.1 | Wheat | nucleus | 64.77 | 6.0 |
| HORVU2Hr1G017760.4 | Barley | plastid | 64.77 | 5.5 |
| Os07t0679700-01 | Rice | nucleus | 59.09 | 5.48 |
| GSMUA_Achr5P27930_001 | Banana | nucleus | 22.73 | 3.45 |
| GSMUA_Achr8P01750_001 | Banana | nucleus | 18.18 | 1.87 |
| KRH72829 | Soybean | nucleus | 14.77 | 1.81 |
| KRH17186 | Soybean | nucleus | 12.5 | 1.52 |
| KRG98129 | Soybean | nucleus | 13.64 | 1.28 |
| VIT_06s0004g08100.t01 | Wine grape | nucleus | 12.5 | 1.27 |
| KRH30646 | Soybean | nucleus | 12.5 | 1.21 |
| VIT_08s0058g01300.t01 | Wine grape | nucleus | 10.23 | 0.97 |
| Zm00001d042396_P003 | Maize | nucleus | 6.82 | 0.87 |
| Zm00001d006597_P003 | Maize | plastid | 9.09 | 0.83 |
| Solyc10g075030.1.1 | Tomato | nucleus | 7.95 | 0.8 |
| CDX72340 | Canola | nucleus | 6.82 | 0.78 |
| CDY13468 | Canola | nucleus | 6.82 | 0.78 |
| Bra023968.1-P | Field mustard | nucleus | 6.82 | 0.78 |
| KRH65426 | Soybean | nucleus | 7.95 | 0.77 |
| KRH76125 | Soybean | nucleus | 7.95 | 0.77 |
| AT4G32010.1 | Thale cress | nucleus | 6.82 | 0.77 |
| Bra021635.1-P | Field mustard | nucleus | 5.68 | 0.65 |
| Bra022801.1-P | Field mustard | nucleus | 5.68 | 0.64 |
| CDX84832 | Canola | nucleus | 5.68 | 0.64 |
| CDY29672 | Canola | nucleus | 5.68 | 0.63 |
| AT2G30470.1 | Thale cress | nucleus | 5.68 | 0.63 |
| Zm00001d021790_P010 | Maize | nucleus | 6.82 | 0.62 |
| CDX97828 | Canola | nucleus | 4.55 | 0.52 |
| CDY10738 | Canola | nucleus | 4.55 | 0.51 |
| Bra018313.1-P | Field mustard | nucleus | 4.55 | 0.51 |
| CDY23997 | Canola | nucleus | 4.55 | 0.5 |
| Solyc06g082520.2.1 | Tomato | nucleus | 4.55 | 0.47 |
| Zm00001d001838_P001 | Maize | nucleus | 2.27 | 0.46 |
| CDY02066 | Canola | nucleus | 3.41 | 0.38 |
| Zm00001d052750_P001 | Maize | nucleus | 1.14 | 0.27 |
| Zm00001d011712_P001 | Maize | mitochondrion | 1.14 | 0.26 |
| Zm00001d034965_P002 | Maize | nucleus | 0.0 | 0.0 |
| KRH37982 | Soybean | cytosol, nucleus, plastid | 0.0 | 0.0 |
| PGSC0003DMT400057590 | Potato | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Zm00001d029836_P001 | EnsemblPlants:Zm00001d029836_T001 | EnsemblPlantsGene:Zm00001d029836 | ProteinID:ONL99678.1 | UniParc:UPI00084408F3 | UniProt:A0A1D6K810 |
| MapMan:35.1 | : | : | : | : | : |
Description
B3 domain-containing transcription factor LEC2
Coordinates
chr1:+:89480274..89481750
Molecular Weight (calculated)
9761.7 Da
IEP (calculated)
9.381
GRAVY (calculated)
-0.465
Length
88 amino acids
Sequence
(BLAST)
(BLAST)
1: MKNSAAQSAS GQVVPKLFPC PNNLLFFGKS DELLSSRKFE QPPSPMLDSR NDDIAIVNKS NHLFMVISIE AGQSSNILRQ KEIENGRK
001: MEYDRTLNLI PYGLQGVREE EEIEEDDEES MTLSSVPENE TSECSSPPAT YPPIPPRPKT PREPMEFLCR SWSLSTSEIS LALSSQKSDK QLNKNPNISQ
101: LADVTSLAPV APPPPLQTGK LASAVHARRT GTIGKWFHHR EFVGGKVSAV KKRDRVRVEK AHLHSAVSIA SLATAIAAVT ASGNQDGFAG SKMSSALASA
201: SELLASHCLE LAELAGADHD RVVSAVRSAV DVRGPGDLLT LTAAAATALR GEAALRVRLP KEAKNSAAIS PCERVLPETH SCSSELDRTS TTDELISAKG
301: VEESTGELMQ CTRNGVLRWK HVKVYINKKS QVKHRILIEA NKVICWLNSR VEFCSVSLLQ VIVEIKSKHV VGAFSMKSKG
101: LADVTSLAPV APPPPLQTGK LASAVHARRT GTIGKWFHHR EFVGGKVSAV KKRDRVRVEK AHLHSAVSIA SLATAIAAVT ASGNQDGFAG SKMSSALASA
201: SELLASHCLE LAELAGADHD RVVSAVRSAV DVRGPGDLLT LTAAAATALR GEAALRVRLP KEAKNSAAIS PCERVLPETH SCSSELDRTS TTDELISAKG
301: VEESTGELMQ CTRNGVLRWK HVKVYINKKS QVKHRILIEA NKVICWLNSR VEFCSVSLLQ VIVEIKSKHV VGAFSMKSKG
Arabidopsis Description
At4g16670 [Source:UniProtKB/TrEMBL;Acc:Q5HZ31]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.