Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- peroxisome 1
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d029836_P001 | Maize | plastid | 27.3 | 90.91 |
| Zm00001d037893_P001 | Maize | mitochondrion | 71.67 | 75.0 |
| Zm00001d045970_P001 | Maize | mitochondrion | 64.16 | 72.87 |
| Zm00001d012162_P002 | Maize | mitochondrion | 38.23 | 63.28 |
| Zm00001d022440_P005 | Maize | plastid | 78.5 | 23.88 |
| Zm00001d007173_P003 | Maize | mitochondrion, nucleus | 72.7 | 21.05 |
| TraesCS2D01G105300.1 | Wheat | nucleus | 62.12 | 19.98 |
| TraesCS2A01G105600.1 | Wheat | nucleus | 62.12 | 19.18 |
| TraesCS2B01G122500.1 | Wheat | nucleus | 61.09 | 18.84 |
| Os07t0679700-01 | Rice | nucleus | 59.04 | 18.23 |
| GSMUA_Achr5P27930_001 | Banana | nucleus | 35.49 | 17.93 |
| HORVU2Hr1G017760.4 | Barley | plastid | 60.07 | 16.99 |
| GSMUA_Achr8P01750_001 | Banana | nucleus | 27.65 | 9.45 |
| KRH72829 | Soybean | nucleus | 21.84 | 8.91 |
| KRH17186 | Soybean | nucleus | 19.8 | 8.01 |
| VIT_08s0058g01300.t01 | Wine grape | nucleus | 22.87 | 7.25 |
| Solyc10g075030.1.1 | Tomato | nucleus | 21.5 | 7.17 |
| Solyc06g082520.2.1 | Tomato | nucleus | 20.14 | 6.98 |
| AT4G32010.1 | Thale cress | nucleus | 18.09 | 6.79 |
| CDX97828 | Canola | nucleus | 17.41 | 6.68 |
| Bra021635.1-P | Field mustard | nucleus | 17.41 | 6.59 |
| KRH65426 | Soybean | nucleus | 20.14 | 6.52 |
| CDX72340 | Canola | nucleus | 17.06 | 6.5 |
| KRH76125 | Soybean | nucleus | 20.14 | 6.5 |
| CDY13468 | Canola | nucleus | 17.06 | 6.49 |
| CDY10738 | Canola | nucleus | 17.41 | 6.48 |
| CDY29672 | Canola | nucleus | 17.41 | 6.47 |
| AT2G30470.1 | Thale cress | nucleus | 17.41 | 6.46 |
| CDX84832 | Canola | nucleus | 17.06 | 6.37 |
| Bra023968.1-P | Field mustard | nucleus | 16.72 | 6.36 |
| Bra018313.1-P | Field mustard | nucleus | 17.06 | 6.33 |
| VIT_06s0004g08100.t01 | Wine grape | nucleus | 18.77 | 6.33 |
| Bra022801.1-P | Field mustard | nucleus | 16.38 | 6.13 |
| CDY02066 | Canola | nucleus | 16.38 | 6.12 |
| KRG98129 | Soybean | nucleus | 19.45 | 6.1 |
| CDY23997 | Canola | nucleus | 16.38 | 6.05 |
| KRH30646 | Soybean | nucleus | 18.43 | 5.93 |
| Zm00001d006597_P003 | Maize | plastid | 16.72 | 5.08 |
| Zm00001d021790_P010 | Maize | nucleus | 15.7 | 4.76 |
| KRH37982 | Soybean | cytosol, nucleus, plastid | 0.68 | 4.55 |
| Zm00001d042396_P003 | Maize | nucleus | 5.46 | 2.32 |
| Zm00001d052750_P001 | Maize | nucleus | 2.73 | 2.17 |
| Zm00001d001838_P001 | Maize | nucleus | 2.73 | 1.82 |
| Zm00001d034965_P002 | Maize | nucleus | 2.05 | 1.61 |
| Zm00001d011712_P001 | Maize | mitochondrion | 2.05 | 1.53 |
| PGSC0003DMT400057590 | Potato | nucleus | 0.34 | 0.22 |
Protein Annotations
| EnsemblPlants:Zm00001d038148_P001 | EnsemblPlants:Zm00001d038148_T001 | EnsemblPlantsGene:Zm00001d038148 | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF29 | ProteinID:AQK85821.1 |
| UniParc:UPI000842A7E5 | UniProt:A0A1D6M3V1 | MapMan:35.1 | : | : | : |
Description
B3 domain-containing transcription repressor VAL2
Coordinates
chr6:-:149403737..149406493
Molecular Weight (calculated)
32427.1 Da
IEP (calculated)
6.036
GRAVY (calculated)
-0.206
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MERLLILWQE ESILQILVMP QCSYETLLFQ RLHCGCVASK NSYDLLDSGG IKCVTCMKNS VAQFASGQVV PKLFPCPNNL LFFGKSDELL SSRKFGQPPS
101: LMLDSRNDDI AIVNKSNHLF MVSGIEAGQS SNILRQKEIE NGPRQIKWEQ PTLNIGDMGR PLLTRSQSAL ESPQCTRRDD NKDPTTDSTT SESFPEACLS
201: MNLGIANNGN RMEATSTAER PMLSPTTAIA EGRDLATALS PHKGLGISRP DHQGLVRVQL LIQLETCFRI FVLLDHLLKE GVAINYFLGI GQE
101: LMLDSRNDDI AIVNKSNHLF MVSGIEAGQS SNILRQKEIE NGPRQIKWEQ PTLNIGDMGR PLLTRSQSAL ESPQCTRRDD NKDPTTDSTT SESFPEACLS
201: MNLGIANNGN RMEATSTAER PMLSPTTAIA EGRDLATALS PHKGLGISRP DHQGLVRVQL LIQLETCFRI FVLLDHLLKE GVAINYFLGI GQE
001: MLSSSSMSSS SLSARFCFNH ECFEFKLDHC RPGWRLRSGD FVDLCDRCAS AYEQGKFCDV FHQRASGWRC CESCGKRIHC GCIASASAYT LMDAGGIECL
101: ACARKKFALG PNFSPSPSFL FQSPISEKFK DLSINWSSST RSNQISYQPP SCLDPSVLQF DFRNRGGNNE FSQPASKERV TACTMEKKRG MNDMIGKLMS
201: ENSKHYRVSP FPNVNVYHPL ISLKEGPCGT QLAFPVPITT PIEKTGHSRL DGSNLWHTRN SSPLSRLHND LNGGADSPFE SKSRNVMAHL ETPGKYQVVP
301: RFWPKVSYKN QVLQNQSKES ESVVTPLFEK ILSATDTGKR LVLPKKYAEA FLPQLSHTKG VPLTVQDPMG KEWRFQFRFW PSSKGRIYVL EGVTPFIQTL
401: QLQAGDTVIF SRLDPERKLI LGFRKASITQ SSDQADPADM HSPFEVKKSA YITKETPGVE CSSGKKKSSM MITRSKRQKV EKGDDNLLKL TWEEAQGFLL
501: PPPNLTPSRV VIEDYEFEEY EVHPYVFALI CISGLCRLRI LFSFRFFRIW L
101: ACARKKFALG PNFSPSPSFL FQSPISEKFK DLSINWSSST RSNQISYQPP SCLDPSVLQF DFRNRGGNNE FSQPASKERV TACTMEKKRG MNDMIGKLMS
201: ENSKHYRVSP FPNVNVYHPL ISLKEGPCGT QLAFPVPITT PIEKTGHSRL DGSNLWHTRN SSPLSRLHND LNGGADSPFE SKSRNVMAHL ETPGKYQVVP
301: RFWPKVSYKN QVLQNQSKES ESVVTPLFEK ILSATDTGKR LVLPKKYAEA FLPQLSHTKG VPLTVQDPMG KEWRFQFRFW PSSKGRIYVL EGVTPFIQTL
401: QLQAGDTVIF SRLDPERKLI LGFRKASITQ SSDQADPADM HSPFEVKKSA YITKETPGVE CSSGKKKSSM MITRSKRQKV EKGDDNLLKL TWEEAQGFLL
501: PPPNLTPSRV VIEDYEFEEY EVHPYVFALI CISGLCRLRI LFSFRFFRIW L
Arabidopsis Description
VAL3VP1/ABI3-like 3 [Source:TAIR;Acc:AT4G21550]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.