Factsheet for Zm00001d022440_P005

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 2
nucleus 2
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99914	Sorghum	nucleus	93.98	94.57
Zm00001d029836_P001	Maize	plastid	8.52	93.18
Zm00001d037893_P001	Maize	mitochondrion	24.92	85.71
Zm00001d007173_P003	Maize	mitochondrion, nucleus	88.47	84.19
Zm00001d045970_P001	Maize	mitochondrion	22.33	83.33
Zm00001d012162_P002	Maize	mitochondrion	15.16	82.49
Os07t0679700-01	Rice	nucleus	80.79	81.98
TraesCS2D01G105300.1	Wheat	nucleus	76.32	80.68
TraesCS2B01G122500.1	Wheat	nucleus	79.44	80.53
TraesCS2A01G105600.1	Wheat	nucleus	79.34	80.51
Zm00001d038148_P001	Maize	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	23.88	78.5
KRH37982	Soybean	cytosol, nucleus, plastid	3.53	77.27
HORVU2Hr1G017760.4	Barley	plastid	77.15	71.72
GSMUA_Achr5P27930_001	Banana	nucleus	38.73	64.31
GSMUA_Achr8P01750_001	Banana	nucleus	52.23	58.69
VIT_08s0058g01300.t01	Wine grape	nucleus	49.12	51.19
CDX72340	Canola	nucleus	39.88	49.94
CDY13468	Canola	nucleus	39.67	49.61
Bra023968.1-P	Field mustard	nucleus	39.56	49.48
KRH65426	Soybean	nucleus	46.11	49.06
AT4G32010.1	Thale cress	nucleus	39.25	48.46
KRH76125	Soybean	nucleus	45.17	47.91
Solyc10g075030.1.1	Tomato	nucleus	43.09	47.21
Solyc06g082520.2.1	Tomato	nucleus	41.12	46.86
VIT_06s0004g08100.t01	Wine grape	nucleus	41.74	46.26
CDX97828	Canola	nucleus	36.55	46.13
CDY02066	Canola	nucleus	37.38	45.92
Bra021635.1-P	Field mustard	nucleus	36.86	45.87
CDY10738	Canola	nucleus	37.18	45.49
Bra018313.1-P	Field mustard	nucleus	37.18	45.32
CDX84832	Canola	nucleus	36.76	45.1
CDY29672	Canola	nucleus	36.86	45.05
Bra022801.1-P	Field mustard	nucleus	36.55	44.96
AT2G30470.1	Thale cress	nucleus	36.14	44.05
CDY23997	Canola	nucleus	36.03	43.76
KRH30646	Soybean	nucleus	41.33	43.69
KRH72829	Soybean	nucleus	32.29	43.31
KRG98129	Soybean	nucleus	41.12	42.35
KRH17186	Soybean	nucleus	31.46	41.85
Zm00001d021790_P010	Maize	nucleus	33.75	33.61
Zm00001d006597_P003	Maize	plastid	33.64	33.58
PGSC0003DMT400057590	Potato	nucleus	10.8	22.51
Zm00001d011712_P001	Maize	mitochondrion	6.65	16.33
Zm00001d034965_P002	Maize	nucleus	6.23	16.13
Zm00001d052750_P001	Maize	nucleus	6.02	15.72
Zm00001d001838_P001	Maize	nucleus	6.02	13.21
Zm00001d042396_P003	Maize	nucleus	7.89	11.0

Protein Annotations

EntrezGene:100382023	MapMan:15.5.5.4	Gene3D:2.40.330.10	Gene3D:3.30.40.100	InterPro:B3_DNA-bd	EMBL:BT062927
UniProt:C0P3Q8	InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003340	InterPro:IPR011124	InterPro:IPR015300	ProteinID:ONM60625.1	ProteinID:ONM60627.1	ProteinID:ONM60628.1
PFAM:PF02362	PFAM:PF07496	PFscan:PS50863	PFscan:PS51050	PANTHER:PTHR23336	PANTHER:PTHR23336:SF29
SMART:SM01019	SUPFAM:SSF101936	UniParc:UPI0001948E21	EnsemblPlantsGene:Zm00001d022440	EnsemblPlants:Zm00001d022440_P005	EnsemblPlants:Zm00001d022440_T005
InterPro:Znf_CW	SEG:seg	:	:	:	:

Description

ABI3-VP1-transcription factor 32B3 domain-containing transcription repressor VAL2

Coordinates

chr7:+:177716517..177723636

Molecular Weight (calculated)

105147.0 Da

IEP (calculated)

6.796

GRAVY (calculated)

-0.500

Length

963 amino acids

Sequence
(BLAST)

001: MAMAGAGAAA AAAKRCMNPA CGALPASSVV VGAGGDWRKG WPLRSGGFAL LCDKCGLAYE QFVFCDIFHQ KESGWRDCSF CGKRLHCGCV ASKNSYDLLD
101: SGGIQCVTCM KNSAAQSASG QVVPKLFPCP NNLLFFGKSD ELLSSRKFEQ PPSLMLDSRN DDIAIVNKSS HLFMVSGIEA GQSSNILRQK EIENGPRQIK
201: WEQPTLNIGD MGRPLLTRSQ SALESPQCTR RDDNKDPTTD STTSESFPEA CLSMNLGIAN NGNRMEATST AERPMLSPTT AIAEGRELTT ALSPFQHAQR
301: ARHFLTRPPR VGEGAAFDPT RDMFPHLRVA RPPAEGRGRN QLLPRYWPRI TDQELQQISG DSNSTIVPLF EKVLSASDAG RIGRLVLPKA CAEAYFPPIS
401: QPEGRPLTIQ DARGKEWHFQ FRFWPNNNSR MYVLEGVTPC IQSLQLQAGD TVTFSRIDPG GKLVMGFRKA TNTVSLPDSQ ISAIANGSLL SETLFSTANE
501: SIGVVSGYPG FLHSIKGAAD FHPSSLYDHH INSADGDVSW NKADKFGSRP DEGSLQFLQK RSRNIGSKSR RFLIDAEDAM ELKLTWEEAQ ELLRPAPTAK
601: PTVVMIEDYE FEEYDEPPVF AKRSIFTIRA TGEQDQWIQC DECSKWRRLP LNVIVASKWT CTDNSWDPKC CSCSAPEELT PKELQSVMQQ YEEMRRRKGS
701: YGLKLNVAEM DASSFDALAT GAVFGEVGNQ GTASVATTTR HPRHRPGCTC IVCIQPPSGK GPKHNPACTC NVCMTVRRRF KTLMMRKKQR QSEREEAEAS
801: KKIAWVNRDE PEGSSLSRSP QTLDTTRDSS DVTMFDKVAA DVNKGHIDLN FHPAAPAVRG AGDQGQNGAQ QPRAVSMMGL LEVASRPLDN YMKQNGLTSL
901: AGEQGGGSSS TATVPPAPVE SEDRTSDEGR VASAEREADA MAIDEAGENQ QDKPADSAAA AAT

Best Arabidopsis Sequence Match ( AT2G30470.1 )
(BLAST)

001: MFEVKMGSKM CMNASCGTTS TVEWKKGWPL RSGLLADLCY RCGSAYESSL FCEQFHKDQS GWRECYLCSK RLHCGCIASK VTIELMDYGG VGCSTCACCH
101: QLNLNTRGEN PGVFSRLPMK TLADRQHVNG ESGGRNEGDL FSQPLVMGGD KREEFMPHRG FGKLMSPEST TTGHRLDAAG EMHESSPLQP SLNMGLAVNP
201: FSPSFATEAV EGMKHISPSQ SNMVHCSASN ILQKPSRPAI STPPVASKSA QARIGRPPVE GRGRGHLLPR YWPKYTDKEV QQISGNLNLN IVPLFEKTLS
301: ASDAGRIGRL VLPKACAEAY FPPISQSEGI PLKIQDVRGR EWTFQFRYWP NNNSRMYVLE GVTPCIQSMM LQAGDTVTFS RVDPGGKLIM GSRKAANAGD
401: MQGCGLTNGT STEDTSSSGV TENPPSINGS SCISLIPKEL NGMPENLNSE TNGGRIGDDP TRVKEKKRTR TIGAKNKRLL LHSEESMELR LTWEEAQDLL
501: RPSPSVKPTI VVIEEQEIEE YDEPPVFGKR TIVTTKPSGE QERWATCDDC SKWRRLPVDA LLSFKWTCID NVWDVSRCSC SAPEESLKEL ENVLKVGREH
601: KKRRTGESQA AKSQQEPCGL DALASAAVLG DTIGEPEVAT TTRHPRHRAG CSCIVCIQPP SGKGRHKPTC GCTVCSTVKR RFKTLMMRRK KKQLERDVTA
701: AEDKKKKDME LAESDKSKEE KEVNTARIDL NSDPYNKEDV EAVAVEKEES RKRAIGQCSG VVAQDASDVL GVTELEGEGK NVREEPRVSS

Arabidopsis Description

VAL1B3 domain-containing transcription repressor VAL1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4L5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.