Factsheet for Zm00001d007173_P003

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

mitochondrion 4
nucleus 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d022440_P005	Maize	plastid	84.19	88.47
Zm00001d029836_P001	Maize	plastid	7.51	86.36
Os07t0679700-01	Rice	nucleus	73.42	78.29
Zm00001d037893_P001	Maize	mitochondrion	21.64	78.21
Zm00001d045970_P001	Maize	mitochondrion	19.76	77.52
Zm00001d012162_P002	Maize	mitochondrion	13.54	77.4
KRH37982	Soybean	cytosol, nucleus, plastid	3.36	77.27
TraesCS2D01G105300.1	Wheat	nucleus	68.97	76.62
TraesCS2B01G122500.1	Wheat	nucleus	71.74	76.42
TraesCS2A01G105600.1	Wheat	nucleus	71.64	76.4
Zm00001d038148_P001	Maize	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	21.05	72.7
HORVU2Hr1G017760.4	Barley	plastid	69.47	67.86
GSMUA_Achr5P27930_001	Banana	nucleus	34.39	60.0
GSMUA_Achr8P01750_001	Banana	nucleus	47.23	55.78
VIT_08s0058g01300.t01	Wine grape	nucleus	44.27	48.48
CDX72340	Canola	nucleus	35.77	47.07
CDY13468	Canola	nucleus	35.57	46.75
Bra023968.1-P	Field mustard	nucleus	35.47	46.62
KRH65426	Soybean	nucleus	41.6	46.52
AT4G32010.1	Thale cress	nucleus	35.38	45.9
KRH76125	Soybean	nucleus	40.71	45.37
Solyc10g075030.1.1	Tomato	nucleus	38.93	44.82
Solyc06g082520.2.1	Tomato	nucleus	37.06	44.38
CDY02066	Canola	nucleus	33.89	43.75
VIT_06s0004g08100.t01	Wine grape	nucleus	37.25	43.38
CDX97828	Canola	nucleus	32.71	43.38
Bra021635.1-P	Field mustard	nucleus	33.0	43.15
CDY10738	Canola	nucleus	33.5	43.08
Bra018313.1-P	Field mustard	nucleus	33.6	43.04
CDY29672	Canola	nucleus	33.0	42.39
CDX84832	Canola	nucleus	32.81	42.29
Bra022801.1-P	Field mustard	nucleus	32.61	42.15
KRH30646	Soybean	nucleus	37.85	42.04
AT2G30470.1	Thale cress	nucleus	32.81	42.03
CDY23997	Canola	nucleus	32.21	41.11
KRG98129	Soybean	nucleus	37.75	40.86
KRH72829	Soybean	nucleus	28.85	40.67
KRH17186	Soybean	nucleus	27.96	39.09
Zm00001d021790_P010	Maize	nucleus	29.74	31.13
Zm00001d006597_P003	Maize	plastid	29.64	31.09
PGSC0003DMT400057590	Potato	nucleus	10.08	22.08
Zm00001d034965_P002	Maize	nucleus	5.34	14.52
Zm00001d052750_P001	Maize	nucleus	5.24	14.36
Zm00001d011712_P001	Maize	mitochondrion	5.24	13.52
Zm00001d001838_P001	Maize	nucleus	4.94	11.39
Zm00001d042396_P003	Maize	nucleus	7.02	10.28

Protein Annotations

EntrezGene:100216901	MapMan:15.5.5.4	Gene3D:2.40.330.10	Gene3D:3.30.40.100	UniProt:A0A1D6F4F1	InterPro:B3_DNA-bd
InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003340
InterPro:IPR011124	InterPro:IPR015300	ProteinID:ONM26205.1	PFAM:PF02362	PFAM:PF07496	PFscan:PS50863
PFscan:PS51050	PANTHER:PTHR23336	PANTHER:PTHR23336:SF29	SMART:SM01019	SUPFAM:SSF101936	UniParc:UPI000843BEA1
EnsemblPlantsGene:Zm00001d007173	EnsemblPlants:Zm00001d007173_P003	EnsemblPlants:Zm00001d007173_T003	InterPro:Znf_CW	SEG:seg	:

Description

ABI3-VP1-transcription factor 39B3 domain-containing transcription repressor VAL2

Coordinates

chr2:-:223808167..223823179

Molecular Weight (calculated)

111396.0 Da

IEP (calculated)

7.149

GRAVY (calculated)

-0.454

Length

1012 amino acids

Sequence
(BLAST)

0001: MRSACSGRTA CARRPPMAMA AAAAAATKRC MNPACGAPAS VLGAGGDWRK GWPLRSGCFA LLCDKCGLAY EQFVFCDIFH QKESGWRDCS FCGKRLHCGC
0101: VASKNSYDLL DSGGVHCVTC MKNSLAQSAS GQVVPKLFPS PINLRFFGKS DELLSSRNFE QPPSLTLDSR NDDIAFVNKS NHLFMVKGIE AGQSSNILRQ
0201: KEIENGSRQI KWEQPTLSFG DMGRPFLTRS QSALESPQCT RRDDNKDPTT DSTSESFSEA CLSMSLGIAN NVNRMEATST AERPVLLSTT AIAEGRELAT
0301: TLSPFQHAQR ARHFLTRPPR IGEGAAFDPT RDMFPHLRVA RPPADGRGRN QLLPRYWPRI TDQELQQISG EASKAFDFLL VQILQKINMV YCPGSIGSTY
0401: VPSMYDKPYT KGIVFLYIGY TLTWKKLTLT VESKCILMAY FPPISQPEGR PLTIQDARGK EWHFQFRFWP NNNSRMYVLE GVTPCIQSLQ LQAGDTVTFS
0501: RIDPGGKLVM GFRKATNTVS LPDSQISAIA NGSLLSETLF STANENIGVV SGYPGFLHSI KGAADLHPNS LYDHHMNLVD GDVSWNKADK FGSRPDEGSL
0601: QFLQKRSHNI GSKSRRFLID AEDAMELKLT WEEAQELLRP APTAKPTVVM IEDYEFEEYD EPPVFAKRSI FTIRATGEQD QWIQCDDCSK WRRLPLNVIV
0701: APKWTCTDNS WDSKCCSCSA PEELTPRELQ SVLQQYEEMR RRKGSYGLKL NVAEMDASSL DAFATAAVFG EVGNQGSASV ATTTKHPRHR PGCTCIVCIQ
0801: PPSGKGPKHS PACTCNVCMT VRRRFKTLMM RKKQRQSERE EAEAGKKIAW VNRDEPEGSS LSRSPQTLDS TRDNSDVTAT MLDKVSDVNK QGHIDVDLNL
0901: HPAAPAVQAA QQQPRPVSMM GLLEVAGRPL DNYMKQNGLT SLVGEQGGGS SSTATVPPPA LVESEERTSN EGLVPSASAE REPNAMAVDE AGENQQDKAA
1001: DDDDDAVAAA AT

Best Arabidopsis Sequence Match ( AT4G32010.1 )
(BLAST)

001: MESIKVCMNA LCGAASTSGE WKKGWPMRSG DLASLCDKCG CAYEQSIFCE VFHAKESGWR ECNSCDKRLH CGCIASRFMM ELLENGGVTC ISCAKKSGLI
101: SMNVSHESNG KDFPSFASAE HVGSVLERTN LKHLLHFQRI DPTHSSLQMK QEESLLPSSL DALRHKTERK ELSAQPNLSI SLGPTLMTSP FHDAAVDDRS
201: KTNSIFQLAP RSRQLLPKPA NSAPIAAGME PSGSLVSQIH VARPPPEGRG KTQLLPRYWP RITDQELLQL SGQYPHLSNS KIIPLFEKVL SASDAGRIGR
301: LVLPKACAEA YFPPISLPEG LPLKIQDIKG KEWVFQFRFW PNNNSRMYVL EGVTPCIQSM QLQAGDTVTF SRTEPEGKLV MGYRKATNST ATQMFKGSSE
401: PNLNMFSNSL NPGCGDINWS KLEKSEDMAK DNLFLQSSLT SARKRVRNIG TKSKRLLIDS VDVLELKITW EEAQELLRPP QSTKPSIFTL ENQDFEEYDE
501: PPVFGKRTLF VSRQTGEQEQ WVQCDACGKW RQLPVDILLP PKWSCSDNLL DPGRSSCSAP DELSPREQDT LVRQSKEFKR RRLASSNEKL NQSQDASALN
601: SLGNAGITTT GEQGEITVAA TTKHPRHRAG CSCIVCSQPP SGKGKHKPSC TCTVCEAVKR RFRTLMLRKR NKGEAGQASQ QAQSQSECRD ETEVESIPAV
701: ELAAGENIDL NSDPGASRVS MMRLLQAAAF PLEAYLKQKA ISNTAGEQQS SDMVSTEHGS SSAAQETEKD TTNGAHDPVN

Arabidopsis Description

VAL2B3 domain-containing transcription repressor VAL2 [Source:UniProtKB/Swiss-Prot;Acc:Q5CCK4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.